ggKbase home page

LC_0.1_scaffold_283_1

Organism: LC_01_Methanoperedens_46_27

near complete RP 30 / 55 MC: 2 BSCG 28 / 51 MC: 2 ASCG 36 / 38 MC: 1
Location: comp(186..791)

Top 3 Functional Annotations

Value Algorithm Source
AsnC/Lrp family transcriptional regulator n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YW62_METPS similarity UNIREF
DB: UNIREF100
  • Identity: 51.6
  • Coverage: 188.0
  • Bit_score: 216
  • Evalue 1.30e-53
Transcriptional regulator {ECO:0000313|EMBL:KCZ70364.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 192.0
  • Bit_score: 365
  • Evalue 4.20e-98
AsnC/Lrp family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 188.0
  • Bit_score: 216
  • Evalue 3.80e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 606
TTGATATTCCAGGGAATACTCAGGTACATGAAAGAATTCCTTGATCTTGATAAGAGAGACAGAGAGCTATTATCCCTGCTTGAGAAAAACCCTGAGATGTCCCAGAGCGATATTGCAGAAAAACTGAAGATATCCCAGCCTTCGGTCAGCGCCAGGATACATAAGCTAAAACAGAAAGGAGCGCTGGCGCATGTTGTGGGGATGAACCTCCGGAAAGTGAACCTCTACATGGCAAAGGTAGACGTGATAGCCAGCAATACATCATCGGTTCTTGAGATATTCAAGGACTGCCCGTATTTCCTGAACGGGCTTATAGTATCAGGAAGACATAACCTGTGCCTTTTCTTCATAGGCGAGGATATCTCTACCCTTGAGGCTATCGTGGACGGGCACCTGCGGAATAACCCGCTTGTAAAGAACGCGGAGGTAAGCATTGTGATCGCCCCGATGAAAGACCTCATCATGCCTTTGAGGATGAATTTTGATTTTAGCGATTTGCCGCCGTGCGGTAACGGGTGCAACTGCAAGGAGTGCGTGCATCATATATCGAACAGGTGCCTCGGGTGTCCGGTGACGAACAGTTATAGCGGGAATATCTGGAAATGA
PROTEIN sequence
Length: 202
LIFQGILRYMKEFLDLDKRDRELLSLLEKNPEMSQSDIAEKLKISQPSVSARIHKLKQKGALAHVVGMNLRKVNLYMAKVDVIASNTSSVLEIFKDCPYFLNGLIVSGRHNLCLFFIGEDISTLEAIVDGHLRNNPLVKNAEVSIVIAPMKDLIMPLRMNFDFSDLPPCGNGCNCKECVHHISNRCLGCPVTNSYSGNIWK*