ggKbase home page

LC_0.1_scaffold_283_5

Organism: LC_01_Methanoperedens_46_27

near complete RP 30 / 55 MC: 2 BSCG 28 / 51 MC: 2 ASCG 36 / 38 MC: 1
Location: comp(2501..3247)

Top 3 Functional Annotations

Value Algorithm Source
VTC domain-containing protein id=4195016 bin=GWF2_Bacteroidetes_29_10 species=Runella slithyformis genus=Runella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 57.0
  • Coverage: 235.0
  • Bit_score: 276
  • Evalue 1.70e-71
VTC domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 238.0
  • Bit_score: 245
  • Evalue 9.30e-63
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.0
  • Coverage: 245.0
  • Bit_score: 298
  • Evalue 7.80e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 747
ATGGATGCCTTATTCCAAGCCCTCTTAAGATTTGAGCCTATCAGCCTTGAGCAAATGGATAACGTCAGGCTGATGGATAGAACGGATACTAAATTTATATTCAGGATCGAGCAGCTTCCAATCTTCCTCGGGCAAATATCAGGTCATTATCGCATACTTGAGGTCGCAAACTCAAGAATAAGCAGGTATGAAACGCTGTATTTTGATACCGAGGATTTCCAGTTGTATTTAAAGCACCAGAACGGCAAACTCAACCGCTACAAAGTAAGGTACAGGAGATATGTGGAATCCGATCTGAACTTCTTTGAGATCAAATTTAAGAACAACAGGGGAAGGACTATAAAAGACCGCATCAGGAGGAACGGGACCGGATATAAGATAGAGGATGAGGTACAGCACCTGATACACGAAAAAACACCTCTTGATCCGGGGTCATTGATACCGAAACTATGGGTTAATTATTCGAGGATAACCCTTGTGAACAAATTTTCCAGGGAAAGGCTCACCATAGATGTCAATCTGAACTTCAGGAATGAGGCTGCCAATAAATATTTCAACAACCTCGTCATTGCCGAGGTAAAGCAGGAAAAATCCTCGCCTTCCCCGTTTATCAGGGTAATGAGGCAGAACCATATACGCGAGGGCTCGATCAGCAAGTACTGCCTTGGCGTGATATCCCTCTATGAGCAGGTTAAAAAAAATAATTTCAAGCCGAGGTTATTGATCATGAATAAGGTGATGTCATGA
PROTEIN sequence
Length: 249
MDALFQALLRFEPISLEQMDNVRLMDRTDTKFIFRIEQLPIFLGQISGHYRILEVANSRISRYETLYFDTEDFQLYLKHQNGKLNRYKVRYRRYVESDLNFFEIKFKNNRGRTIKDRIRRNGTGYKIEDEVQHLIHEKTPLDPGSLIPKLWVNYSRITLVNKFSRERLTIDVNLNFRNEAANKYFNNLVIAEVKQEKSSPSPFIRVMRQNHIREGSISKYCLGVISLYEQVKKNNFKPRLLIMNKVMS*