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LC_0.1_scaffold_823_13

Organism: LC_01_Methanoperedens_46_27

near complete RP 30 / 55 MC: 2 BSCG 28 / 51 MC: 2 ASCG 36 / 38 MC: 1
Location: 6511..7203

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4e n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=RS4E_UNCMA similarity UNIREF
DB: UNIREF100
  • Identity: 52.2
  • Coverage: 230.0
  • Bit_score: 255
  • Evalue 3.90e-65
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 230.0
  • Bit_score: 403
  • Evalue 1.60e-109
rps4e; 30S ribosomal protein S4e similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 230.0
  • Bit_score: 255
  • Evalue 1.10e-65

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 693
ATGGGAAGACATCAGAAGAGAGTGGCATCTCCGGTATCATGGCCGATCACAAAAAAGACACACGCATGGGTGGTCGGCGCAAATGCGGGACACCATTCAAAGGAAACTGGAATACCGCTGCTTGTAGTTGTCAGGGACTTGCTTAAAGTCGCAAACAACGCAAGGGAAGCTAAAAGGATAATCAATGAAGGGAATATTCTCGTTGACGGCGTGGCGAGAAAGGACTATAAGTACATAGCAGGTCTCTTCGATATAATCTCGCTTCCTGCGCTCAATGAGCATTACCGCGTCCTGCTGGATGCAAATAACAGGTTCAAATTATACAGGGAGAATCCGGACGCACCCAAGTTATGCAGGATCAACAACAAGACCGTCGTAAGAGATGGTAAAGTGCAGCTTAACCTGCATGACGGGGGCAACATCGTCGCGTCCAACGACTACAAGACTTTTGATACGGTGCTGCTGTCGCTGCCTGACCACAATATCGTAAAACATATTCCCTACAGGCAGGGCAGTCTTGCCATGATAGTCGGAGGCGAGCATTCGGGAGAGATCGCGAAGATAAAACAGATCCGCAAGGTCAGGGGCTCGGGGACGAACATGGTCGTGCTGTCCAATGAGAAGGAATTCGAGACCGTTGAAAATTATGTATTCGTCATCGGGGAAACTGCTCCGGAGATAAAGGTGATCTAA
PROTEIN sequence
Length: 231
MGRHQKRVASPVSWPITKKTHAWVVGANAGHHSKETGIPLLVVVRDLLKVANNAREAKRIINEGNILVDGVARKDYKYIAGLFDIISLPALNEHYRVLLDANNRFKLYRENPDAPKLCRINNKTVVRDGKVQLNLHDGGNIVASNDYKTFDTVLLSLPDHNIVKHIPYRQGSLAMIVGGEHSGEIAKIKQIRKVRGSGTNMVVLSNEKEFETVENYVFVIGETAPEIKVI*