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LC_0.1_scaffold_823

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Displaying items 1-30 of 37 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LC_0.1_scaffold_823_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


417..1424
DNA (1008bp) protein (336aa)
UPI0003D1B8E0 related cluster n=1 Tax=unknown RepID=UPI0003D1B8E0
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|SAAS:SAAS00023038}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LSU ribosomal protein L3e (L3p)
LC_0.1_scaffold_823_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


1430..2182
DNA (753bp) protein (251aa)
UPI0003D1C13E related cluster n=1 Tax=unknown RepID=UPI0003D1C13E
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LSU ribosomal protein L1e (L4p)
LC_0.1_scaffold_823_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


2179..2424
DNA (246bp) protein (82aa)
50S ribosomal protein L23P n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8IAI1_METCZ
50S ribosomal protein L23P {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
rpl23p; 50S ribosomal protein L23
LC_0.1_scaffold_823_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


2434..3144
DNA (711bp) protein (237aa)
UPI0003D1C77A related cluster n=1 Tax=unknown RepID=UPI0003D1C77A
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320, ECO:0000256|SAAS:SAAS00010821}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LSU ribosomal protein L2P
LC_0.1_scaffold_823_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


3148..3561
DNA (414bp) protein (138aa)
30S ribosomal protein S19P n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMQ8_METZD
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
30S ribosomal protein S19
LC_0.1_scaffold_823_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


3561..4013
DNA (453bp) protein (151aa)
50S ribosomal protein L22P n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XLU0_METZD
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004007}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
50S ribosomal protein L22
LC_0.1_scaffold_823_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


4013..4918
DNA (906bp) protein (302aa)
30S ribosomal protein S3 n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L1B2_METHD
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ribosomal protein S3, eukaryotic/archaeal type
LC_0.1_scaffold_823_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


4918..5121
DNA (204bp) protein (68aa)
50S ribosomal protein L29P n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KXJ4_METHD
50S ribosomal protein L29P {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ribosomal protein L29
LC_0.1_scaffold_823_9
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

5118..5429
DNA (312bp) protein (104aa)
ribonuclease P (EC:3.1.26.5)
Ribonuclease P protein component 1 n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E6R9_METMS
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_823_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


5443..5766
DNA (324bp) protein (108aa)
30S ribosomal protein S17P n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BZV4_METCG
Archaeal ribosomal protein S17P {ECO:0000313|EMBL:KCZ73299.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
rpsQ; 30S ribosomal protein S17
LC_0.1_scaffold_823_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


5763..6161
DNA (399bp) protein (133aa)
50S ribosomal protein L14 n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BZV3_METCG
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
rplN; 50S ribosomal protein L14b/L23e
LC_0.1_scaffold_823_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


6169..6510
DNA (342bp) protein (114aa)
50S ribosomal protein L24P n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=RL24_METBF
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LSU ribosomal protein L24P
LC_0.1_scaffold_823_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6511..7203
DNA (693bp) protein (231aa)
30S ribosomal protein S4e n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=RS4E_UNCMA
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
rps4e; 30S ribosomal protein S4e
LC_0.1_scaffold_823_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


7204..7710
DNA (507bp) protein (169aa)
50S ribosomal protein L5 n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8S2_METEZ
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
50S ribosomal protein L5
LC_0.1_scaffold_823_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


7711..7863
DNA (153bp) protein (51aa)
30S ribosomal protein S14 type Z n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8IAJ4_METCZ
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
rps14p; 30S ribosomal protein S14
LC_0.1_scaffold_823_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


7873..8262
DNA (390bp) protein (130aa)
30S ribosomal protein S8 n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=RS8_METTP
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
rps8p; 30S ribosomal protein S8P
LC_0.1_scaffold_823_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


8272..8802
DNA (531bp) protein (177aa)
50S ribosomal protein L6 n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8R9_METEZ
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
50S ribosomal protein L6
LC_0.1_scaffold_823_18
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

8808..9452
DNA (645bp) protein (215aa)
50S ribosomal protein L32e n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JJ02_NATP1
ribosomal protein L32E
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_823_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9454..9906
DNA (453bp) protein (151aa)
UPI0003D1B4E1 related cluster n=1 Tax=unknown RepID=UPI0003D1B4E1
50S ribosomal protein L19e {ECO:0000256|HAMAP-Rule:MF_01475}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
50S ribosomal protein L19E
LC_0.1_scaffold_823_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


9909..10427
DNA (519bp) protein (173aa)
50S ribosomal protein L18P n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMP5_METZD
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
50S ribosomal protein L18
LC_0.1_scaffold_823_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


10435..11058
DNA (624bp) protein (208aa)
30S ribosomal protein S5 n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=RS5_METBU
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
rps5p; 30S ribosomal protein S5P
LC_0.1_scaffold_823_22
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


11060..11521
DNA (462bp) protein (154aa)
50S ribosomal protein L30P n=2 Tax=Methanosarcina mazei RepID=RL30_METMA
50S ribosomal protein L30P {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00081760}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LSU ribosomal protein L7e (L30p)
LC_0.1_scaffold_823_23
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists


11524..11994
DNA (471bp) protein (157aa)
50S ribosomal protein L15P n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XLT7_METZD
50S ribosomal protein L15
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_823_24
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12001..13485
DNA (1485bp) protein (495aa)
Protein translocase subunit SecY n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12ZS8_METBU
preprotein translocase subunit SecY
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
LC_0.1_scaffold_823_25
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13728..14303)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1P9U0_METMZ
Uncharacterized protein {ECO:0000313|EMBL:KCZ73284.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_823_26
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14300..15172)
DNA (873bp) protein (291aa)
Triphosphoribosyl-dephospho-CoA synthetase {ECO:0000313|EMBL:KCZ73283.1}; EC=2.4.2.52 {ECO:0000313|EMBL:KCZ73283.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Putative triphosphoribosyl-dephospho-CoA synthase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46C40_METBF
Triphosphoribosyl-dephospho-CoA synthetase
LC_0.1_scaffold_823_27
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15205..15693)
DNA (489bp) protein (163aa)
Type I restriction-modification system, specificity subunit S {ECO:0000313|EMBL:AKB32341.1}; EC=3.1.21.3 {ECO:0000313|EMBL:AKB32341.1};; TaxID=1434119 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae HI350.;"
Putative uncharacterized protein n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z1C5_9EURY
hypothetical protein
LC_0.1_scaffold_823_28
unknown

Not on your lists

comp(15671..16168)
DNA (498bp) protein (166aa)
DNA polymerase beta domain protein region
LC_0.1_scaffold_823_29
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16202..17524)
DNA (1323bp) protein (441aa)
AIPR protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WFM0_9CYAN
Abortive phage infection protein {ECO:0000313|EMBL:KKG51644.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (Methanosarcina frisia).;"
AIPR protein
LC_0.1_scaffold_823_30
Arcobacter nitrofigilis, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17548..20691)
DNA (3144bp) protein (1048aa)
Type III restriction protein res subunit n=1 Tax=Arcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 / NCTC 12251 / CI) RepID=D5V6X1_ARCNC
type III restriction protein res subunit
Type III restriction protein res subunit {ECO:0000313|EMBL:ADG94391.1}; TaxID=572480 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 /; NCTC 12251 / CI) (Campylobacter nitrofigilis).;"
Displaying items 1-30 of 37 in total

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