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LR_AMD_scaffold_6

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Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LR_AMD_scaffold_6_1
unknown

Not on your lists

122..376
DNA (255bp) protein (85aa)

This feature has no annotations

LR_AMD_scaffold_6_2
unknown

Not on your lists

418..609
DNA (192bp) protein (64aa)

This feature has no annotations

LR_AMD_scaffold_6_3
unknown

Not on your lists

654..917
DNA (264bp) protein (88aa)

This feature has no annotations

LR_AMD_scaffold_6_4
unknown

Not on your lists

comp(942..1190)
DNA (249bp) protein (83aa)

This feature has no annotations

LR_AMD_scaffold_6_trna_1
unknown

Not on your lists

comp(1133..1204)
DNA (72bp)
transferRNA Val
LR_AMD_scaffold_6_5
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists

comp(1211..2044)
DNA (834bp) protein (278aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; species="Archaea; Parvarchaeota; Candidatus Micrarchaeum.;" source="Candidatus Micrarchaeum acidiphilum ARMAN-2.;"
Ribonuclease Z Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DH73_9EURY
Ribonuclease Z
LR_AMD_scaffold_6_6

Not on your lists

comp(2148..3266)
DNA (1119bp) protein (373aa)
Fibronectin-binding protein A domain protein Tax=mine drainage metagenome RepID=T0YVU5_9ZZZZ
Fibronectin-binding protein A domain protein {ECO:0000313|EMBL:EQD36067.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
fibronectin-binding protein
LR_AMD_scaffold_6_7

Not on your lists

comp(3280..4071)
DNA (792bp) protein (264aa)
geranylgeranylglyceryl phosphate synthase (EC:2.5.1.41)
Geranylgeranylglyceryl phosphate synthase-like protein Tax=mine drainage metagenome RepID=T0YKW4_9ZZZZ
Geranylgeranylglyceryl phosphate synthase-like protein {ECO:0000313|EMBL:EQD36066.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
LR_AMD_scaffold_6_8

Not on your lists

comp(4105..5112)
DNA (1008bp) protein (336aa)
galE2; protein GalE2 (EC:5.1.3.2)
NAD-dependent epimerase/dehydratase Tax=mine drainage metagenome RepID=T1A2K3_9ZZZZ
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EQD36065.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
LR_AMD_scaffold_6_9

Not on your lists

comp(5090..6001)
DNA (912bp) protein (304aa)
proline dehydrogenase (EC:1.5.99.8)
Proline dehydrogenase (Fragment) Tax=mine drainage metagenome RepID=T1A5B3_9ZZZZ
Proline dehydrogenase {ECO:0000313|EMBL:EQD36064.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
LR_AMD_scaffold_6_10
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists

6179..6580
DNA (402bp) protein (134aa)
Putative uncharacterized protein Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DH78_9EURY
Putative uncharacterized protein {ECO:0000313|EMBL:EET89980.1}; species="Archaea; Parvarchaeota; Candidatus Micrarchaeum.;" source="Candidatus Micrarchaeum acidiphilum ARMAN-2.;"
LR_AMD_scaffold_6_11
unknown

Not on your lists

comp(6609..7655)
DNA (1047bp) protein (349aa)

This feature has no annotations

LR_AMD_scaffold_6_12

Not on your lists

7838..10777
DNA (2940bp) protein (980aa)
Protein belonging to Uncharacterized protein family UPF0027 Tax=mine drainage metagenome RepID=T1AZD3_9ZZZZ
Protein belonging to Uncharacterized protein family UPF0027 {ECO:0000313|EMBL:EQD65941.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
LR_AMD_scaffold_6_13

Not on your lists

10900..11772
DNA (873bp) protein (291aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=T1CFZ4_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD65940.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
LR_AMD_scaffold_6_14

Not on your lists


11769..14450
DNA (2682bp) protein (894aa)
Alanyl-tRNA synthetase {ECO:0000313|EMBL:EQD65939.1}; EC=6.1.1.7 {ECO:0000313|EMBL:EQD65939.1};; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
alaS; alanyl-tRNA ligase (EC:6.1.1.7)
Alanyl-tRNA synthetase (Fragment) Tax=mine drainage metagenome RepID=T1CHS1_9ZZZZ
LR_AMD_scaffold_6_15

Not on your lists

comp(14512..14883)
DNA (372bp) protein (124aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=T1BBU3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD65943.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
LR_AMD_scaffold_6_16
unknown

Not on your lists

comp(14855..15037)
DNA (183bp) protein (61aa)

This feature has no annotations

LR_AMD_scaffold_6_17
unknown

Not on your lists

comp(15043..15225)
DNA (183bp) protein (61aa)

This feature has no annotations

LR_AMD_scaffold_6_18

Not on your lists

15436..16959
DNA (1524bp) protein (508aa)
Transcriptional regulator, AsnC family (Fragment) Tax=mine drainage metagenome RepID=T0Z459_9ZZZZ
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:EQD42731.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
LR_AMD_scaffold_6_19

Not on your lists

comp(17138..17470)
DNA (333bp) protein (111aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=T1AL06_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD42730.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
LR_AMD_scaffold_6_20

Not on your lists

comp(17480..17842)
DNA (363bp) protein (121aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=T1APS5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD42729.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
EamA-like transporter family
LR_AMD_scaffold_6_21
unknown

Not on your lists

17859..18125
DNA (267bp) protein (89aa)

This feature has no annotations

LR_AMD_scaffold_6_22

Not on your lists

18137..20491
DNA (2355bp) protein (785aa)
DNA topoisomerase III Tax=mine drainage metagenome RepID=T0ZCB8_9ZZZZ
DNA topoisomerase III {ECO:0000313|EMBL:EQD42728.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
DNA topoisomerase 1
LR_AMD_scaffold_6_23

Not on your lists

20492..21058
DNA (567bp) protein (189aa)
tRNA (adenine-N(1)-)-methyltransferase (EC:2.1.1.36)
tRNA methyltransferase complex subunit Tax=mine drainage metagenome RepID=T0ZEM7_9ZZZZ
tRNA methyltransferase complex subunit {ECO:0000313|EMBL:EQD42727.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
LR_AMD_scaffold_6_24

Not on your lists

comp(21060..21710)
DNA (651bp) protein (217aa)
Phosphoglycolate phosphatase (Fragment) Tax=mine drainage metagenome RepID=T1ATU2_9ZZZZ
Phosphoglycolate phosphatase {ECO:0000313|EMBL:EQD60842.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
HAD superfamily hydrolase
LR_AMD_scaffold_6_25

Not on your lists


comp(21714..24548)
DNA (2835bp) protein (945aa)
Leucyl-tRNA synthetase {ECO:0000313|EMBL:EQD60841.1}; EC=6.1.1.- {ECO:0000313|EMBL:EQD60841.1};; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Leucyl-tRNA synthetase Tax=mine drainage metagenome RepID=T1AJU1_9ZZZZ
leucyl-tRNA synthetase
LR_AMD_scaffold_6_26

Not on your lists

24624..25571
DNA (948bp) protein (316aa)
Peptidase A24A prepilin type IV {ECO:0000313|EMBL:EQD39017.1}; EC=3.4.23.- {ECO:0000313|EMBL:EQD39017.1};; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Peptidase A24A prepilin type IV Tax=mine drainage metagenome RepID=T0Z407_9ZZZZ
LR_AMD_scaffold_6_27

Not on your lists

25575..26384
DNA (810bp) protein (270aa)
Uncharacterized protein (Fragment) Tax=mine drainage metagenome RepID=T0YTW4_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD39016.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
LR_AMD_scaffold_6_28

Not on your lists

comp(26444..27382)
DNA (939bp) protein (313aa)
Transcriptional regulator, XRE family (Fragment) Tax=mine drainage metagenome RepID=T0ZY01_9ZZZZ
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EQD49443.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
LR_AMD_scaffold_6_29
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists

27424..29160
DNA (1737bp) protein (579aa)
PHP domain protein Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGN5_9EURY
PHP domain protein {ECO:0000313|EMBL:EET90382.1}; species="Archaea; Parvarchaeota; Candidatus Micrarchaeum.;" source="Candidatus Micrarchaeum acidiphilum ARMAN-2.;"
hypothetical protein
Displaying items 1-30 of 33 in total

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