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RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_160

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Displaying items 1-30 of 62 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_160_1
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(199..705)
DNA (507bp) protein (169aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_160_2
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(726..1019)
DNA (294bp) protein (98aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_160_3
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(1019..3940)
DNA (2922bp) protein (974aa)
type ii site-specific deoxyribonuclease (EC:3.1.21.4) Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Eco57IR: type IIS restriction enzyme Eco57I n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0G5C1_9DELT
eco57IR: type IIS restriction enzyme Eco57I
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_160_4
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(3944..4786)
DNA (843bp) protein (281aa)
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein id=13155 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
phage antirepressor protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_160_5
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(4843..6414)
DNA (1572bp) protein (524aa)
formate--tetrahydrofolate ligase (EC:6.3.4.3); K01938 formate--tetrahydrofolate ligase [EC:6.3.4.3] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
formate--tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814) RepID=D9TRB4_THETC
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_160_6
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(6558..6755)
DNA (198bp) protein (66aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_160_7
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

7077..7316
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Pontibacter sp. BAB1700 RepID=J0LPX2_9BACT
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_160_8
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

7294..7530
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGW0_RHOMR
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_160_9
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(7755..10685)
DNA (2931bp) protein (977aa)
hypothetical protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002E61A63
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
helicase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_160_10
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(10721..13117)
DNA (2397bp) protein (799aa)
SNF2-related protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
SNF2-related protein id=3380122 bin=GWF2_Bacteroidetes_35_48 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
SNF2-related protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_160_11
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(13142..13297)
DNA (156bp) protein (52aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_160_12
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(13757..15670)
DNA (1914bp) protein (638aa)
deoxyxylulose-5-phosphate synthase; K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
1-deoxy-D-xylulose-5-phosphate synthase id=2078559 bin=GWD2_RBX1-related_39_127 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
deoxyxylulose-5-phosphate synthase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_160_13
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(15651..16118)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Musa acuminata subsp. malaccensis RepID=M0SK26_MUSAM
uncharacterized LOC100260453 Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_160_14
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(16115..16825)
DNA (711bp) protein (237aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; K00991 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase id=3853150 bin=GWC2_Deltaproteobacteria_42_51 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_160_15
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(16822..17472)
DNA (651bp) protein (217aa)
Cobalt-dependent proline dipeptidase n=1 Tax=Pyrococcus sp. ST04 RepID=I3RE68_9EURY
cobalt-dependent proline dipeptidase Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
cobalt-dependent proline dipeptidase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_160_16
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(17511..17951)
DNA (441bp) protein (147aa)
3-dehydroquinate dehydratase (EC:4.2.1.10); K03786 3-dehydroquinate dehydratase II [EC:4.2.1.10] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase id=4387126 bin=GWA2_OP3_53_43 species=Gloeocapsa sp. PCC 7428 genus=Gloeocapsa taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_160_17
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

18047..20077
DNA (2031bp) protein (677aa)
penicillin-binding protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
UPI00020A9D29 related cluster id=2110045 bin=GWD2_RBX1-related_39_127 species=Thermodesulfobium narugense genus=Thermodesulfobium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
penicillin-binding protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_160_18
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

20052..21449
DNA (1398bp) protein (466aa)
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I n=1 Tax=Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47) RepID=D9TJF9_CALOO
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_160_19
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(21474..22838)
DNA (1365bp) protein (455aa)
PPIC-type PPIASE family protein,tetratricopeptide repeat protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
PPIC-type PPIASE family protein,tetratricopeptide repeat protein id=24608923 bin=RAAC11 species=Orenia marismortui genus=Orenia taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
PPIC-type PPIASE family protein,tetratricopeptide repeat protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_160_20
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(22853..23740)
DNA (888bp) protein (296aa)
hypothetical protein; K09811 cell division transport system permease protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein; K09811 cell division transport system permease protein id=24608922 bin=RAAC11 species=Succinispira mobilis genus=Succinispira taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_160_21
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(23733..24413)
DNA (681bp) protein (227aa)
cell division ATP-binding protein FtsE Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Cell division ATP-binding protein FtsE id=2187857 bin=GWE2_RBX1_39_32 species=unknown genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
cell division ATP-binding protein FtsE
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_160_22
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(24514..25761)
DNA (1248bp) protein (416aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase id=1982824 bin=GWE2_RBX1_39_32 species=Syntrophobotulus glycolicus genus=Syntrophobotulus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_160_23
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

26032..26259
DNA (228bp) protein (76aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_160_24
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

26263..27423
DNA (1161bp) protein (387aa)
IMP dehydrogenase family protein n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XQI1_STAC7
IMP dehydrogenase family protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
IMP dehydrogenase family protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_160_25
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(27465..28307)
DNA (843bp) protein (281aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_160_26
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

28423..29976
DNA (1554bp) protein (518aa)
GMP synthase; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
GMP synthase [glutamine-hydrolyzing] id=1853751 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GMP synthase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_160_27
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(30101..31180)
DNA (1080bp) protein (360aa)
Aminodeoxychorismate lyase n=1 Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C4X2_THEGP
aminodeoxychorismate lyase; K07082 UPF0755 protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
aminodeoxychorismate lyase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_160_28
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(31177..31596)
DNA (420bp) protein (140aa)
Holliday junction resolvase; K07447 putative holliday junction resolvase [EC:3.1.-.-] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Putative Holliday junction resolvase n=1 Tax=Desulfotomaculum nigrificans DSM 574 RepID=F0DKC2_9FIRM
Holliday junction resolvase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_160_29
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists


comp(31577..34300)
DNA (2724bp) protein (908aa)
alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Alanine--tRNA ligase n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8EAY1_9FIRM
alanyl-tRNA synthetase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_160_30
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(34311..34919)
DNA (609bp) protein (203aa)
thymidylate kinase (EC:2.7.4.9); K00943 dTMP kinase [EC:2.7.4.9] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase id=4210436 bin=GWF2_OP9_related_35_9 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
Displaying items 1-30 of 62 in total

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