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RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_145

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Displaying items 1-30 of 61 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_145_1
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

2..94
DNA (93bp) protein (31aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_145_2
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(573..3506)
DNA (2934bp) protein (978aa)
id=2121646 Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
id=2121646 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_145_3
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

3579..4298
DNA (720bp) protein (240aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_145_4
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(4388..5509)
DNA (1122bp) protein (374aa)
putative dehydrogenase Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Putative dehydrogenase id=3930281 bin=GWF2_Nitrospirae_44_13 species=Desulfosporosinus acidiphilus genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
putative dehydrogenase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_145_5
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(5509..6546)
DNA (1038bp) protein (346aa)
nucleoside-diphosphate-sugar epimerase Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Nucleoside-diphosphate-sugar epimerase id=3031907 bin=GWC1_Spirochaetes_27_15 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
nucleoside-diphosphate-sugar epimerase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_145_6
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(6563..7549)
DNA (987bp) protein (329aa)
ADP-L-glycero-D-manno-heptose-6-epimerase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z6Y6_MELRP
ADP-L-glycero-D-manno-heptose-6-epimerase Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
ADP-L-glycero-D-manno-heptose-6-epimerase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_145_7
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(7531..8619)
DNA (1089bp) protein (363aa)
deoxyhypusine synthase-like protein; K00809 deoxyhypusine synthase [EC:2.5.1.46] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Deoxyhypusine synthase-like protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YJD3_9BACT
deoxyhypusine synthase-like protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_145_8
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

8731..8958
DNA (228bp) protein (76aa)
Sodium/hydrogen exchanger n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JYC3_DESAC
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
monovalent cation antiporter
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_145_9
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(9071..12253)
DNA (3183bp) protein (1061aa)
carbamoyl-phosphate synthase large subunit; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Carbamoyl-phosphate synthase large chain n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GF49_GEOUR
carbamoyl-phosphate synthase large subunit
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_145_10
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(12326..12673)
DNA (348bp) protein (116aa)
CHP02436-containing protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
CHP02436-containing protein id=4202421 bin=GWF2_OP3_43_52 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_145_11
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(12748..13458)
DNA (711bp) protein (237aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_145_12
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(13490..14626)
DNA (1137bp) protein (379aa)
carA; carbamoyl phosphate synthetase, glutamine amidotransferase small subunit (EC:6.3.5.5) Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
carA; carbamoyl phosphate synthetase, glutamine amidotransferase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain id=4368724 bin=GWC2_Deltaproteobacteria_42_51 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_145_13
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(14744..17515)
DNA (2772bp) protein (924aa)
UPF0182 protein Hore_10710 n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CX07_HALOH
putative glutamate--cysteine ligase/putative amino acid ligase; K09118 hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
putative glutamate--cysteine ligase/putative amino acid ligase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_145_14
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

17659..17859
DNA (201bp) protein (67aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_145_15
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

17941..19173
DNA (1233bp) protein (411aa)
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Gll0083 protein id=1750126 bin=GWE2_RBX1_39_32 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_145_16
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(19170..20711)
DNA (1542bp) protein (514aa)
NADH-ubiquinone/plastoquinone (complex I) oxidoreductase Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
NADH/Ubiquinone/plastoquinone (complex I); K05568 multicomponent Na+:H+ antiporter subunit D id=7200999 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
NADH-ubiquinone/plastoquinone (complex I) oxidoreductase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_145_17
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(20708..22171)
DNA (1464bp) protein (488aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5); K05568 multicomponent Na+:H+ antiporter subunit D Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
NADH dehydrogenase (quinone) (EC:1.6.99.5)
NADH dehydrogenase (Quinone) n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TVL5_ALKMQ
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_145_18
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(22225..22575)
DNA (351bp) protein (117aa)
Multisubunit Na+/H+ antiporter, MnhC subunit n=1 Tax=Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) RepID=H2J5S1_MARPK
multisubunit Na+/H+ antiporter subunit MnhC; K05567 multicomponent Na+:H+ antiporter subunit C Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
putative Na(+) H(+) antiporter subunit C
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_145_19
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(22572..23000)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5E2H2_9FIRM
Na+/H+ antiporter MnhB subunit-related protein; K05566 multicomponent Na+:H+ antiporter subunit B Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Na(+) H(+) antiporter subunit B
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_145_20
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(22997..23266)
DNA (270bp) protein (90aa)
monovalent cation/H+ antiporter subunit B; K05566 multicomponent Na+:H+ antiporter subunit B Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
NADH/ubiquinone/plastoquinone (complex I); K05565 multicomponent Na+:H+ antiporter subunit A id=16829765 bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
monovalent cation/H+ antiporter subunit B
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_145_21
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(23263..23550)
DNA (288bp) protein (96aa)
Putative multicomponent Na+:H+ antiporter subunit B n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TVL9_ALKMQ
putative multicomponent Na+:H+ antiporter subunit B Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
putative multicomponent Na+:H+ antiporter subunit B
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_145_22
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(23489..23788)
DNA (300bp) protein (100aa)
sodium:proton antiporter n=1 Tax=Geovibrio thiophilus RepID=UPI0003B32CE1
monovalent cation/proton antiporter, MnhG/PhaG subunit; K05571 multicomponent Na+:H+ antiporter subunit G Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
monovalent cation/proton antiporter, MnhG/PhaG subunit
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_145_23
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(23785..24048)
DNA (264bp) protein (88aa)
Multiple resistance and pH regulation protein F n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=D3TD41_ACIB4
multiple resistance and pH regulation protein F; K05570 multicomponent Na+:H+ antiporter subunit F Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
multiple resistance and pH regulation protein F
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_145_24
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(24045..24557)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI00036CCD6F
cation antiporter; K05569 multicomponent Na+:H+ antiporter subunit E Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
cation antiporter
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_145_25
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(24554..25579)
DNA (1026bp) protein (342aa)
Rossmann fold nucleotide-binding protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Putative uncharacterized protein id=4482162 bin=GWF2_Lentisphaerae_50_93 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Rossmann fold nucleotide-binding protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_145_26
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

25775..27835
DNA (2061bp) protein (687aa)
Fe-S oxidoreductase
Radical SAM domain protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Radical SAM domain protein id=4408279 bin=GWA2_Elusimicrobia_51_34 species=unknown genus=Magnetococcus taxon_order=Magnetococcales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_145_27
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(27860..28444)
DNA (585bp) protein (195aa)
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_145_28
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

28595..29992
DNA (1398bp) protein (466aa)
Sensor protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVF4_9BACT id=126830 bin=ACD79 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
multi-sensor signal transduction histidine kinase Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
multi-sensor signal transduction histidine kinase
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_145_29
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(29982..30392)
DNA (411bp) protein (137aa)
histidine kinase n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B42AE6
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
response regulator/PAS domain-containing protein
RIFOXYB2_FULL_CP_42_35_rifoxyb2_full_scaffold_145_30
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

30587..32053
DNA (1467bp) protein (489aa)
alpha,alpha-trehalose-phosphate synthase (EC:2.4.1.15); K00697 trehalose 6-phosphate synthase [EC:2.4.1.15] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
alpha,alpha-trehalose-phosphate synthase (EC:2.4.1.15)
Alpha,alpha-trehalose-phosphate synthase n=1 Tax=planctomycete KSU-1 RepID=I3IQA3_9PLAN
Displaying items 1-30 of 61 in total

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