ggKbase home page

Me_Mat_scaffold_1

Search features with annotation key words

Displaying items 1-30 of 46 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Me_Mat_scaffold_1_1
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists

290..1522
DNA (1233bp) protein (411aa)
Aminotransferase class I and II Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIS3_9EURY
Aminotransferase class I and II {ECO:0000313|EMBL:EET89847.1}; species="Archaea; Parvarchaeota; Candidatus Micrarchaeum.;" source="Candidatus Micrarchaeum acidiphilum ARMAN-2.;"
aspartate aminotransferase 1
Me_Mat_scaffold_1_trna_1
unknown

Not on your lists

1535..1606
DNA (72bp)
transferRNA Val
Me_Mat_scaffold_1_2
unknown

Not on your lists

comp(1650..2027)
DNA (378bp) protein (126aa)

This feature has no annotations

Me_Mat_scaffold_1_3
Metallosphaera yellowstonensis, Metallosphaera, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

2267..2806
DNA (540bp) protein (180aa)
Uncharacterized protein Tax=Metallosphaera yellowstonensis MK1 RepID=H2C0P9_9CREN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHP71311.1}; species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Metallosphaera.;" source="Metallosphaera yellowstonensis MK1.;"
Me_Mat_scaffold_1_4
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(2807..3238)
DNA (432bp) protein (144aa)
Uncharacterized protein Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CHR9_THET1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ43290.1}; species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
Me_Mat_scaffold_1_trna_2
unknown

Not on your lists

comp(3277..3348)
DNA (72bp)
transferRNA Asn
Me_Mat_scaffold_1_5
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists

comp(3356..4039)
DNA (684bp) protein (228aa)
Putative uncharacterized protein Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGP1_9EURY
Putative uncharacterized protein {ECO:0000313|EMBL:EET90388.1}; species="Archaea; Parvarchaeota; Candidatus Micrarchaeum.;" source="Candidatus Micrarchaeum acidiphilum ARMAN-2.;"
Me_Mat_scaffold_1_6

Not on your lists

comp(4050..4886)
DNA (837bp) protein (279aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=T1A0G9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD35325.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Me_Mat_scaffold_1_7

Not on your lists

comp(4903..5478)
DNA (576bp) protein (192aa)
Uncharacterized protein (Fragment) Tax=mine drainage metagenome RepID=T1A653_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD52383.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Me_Mat_scaffold_1_8
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists

comp(5456..6658)
DNA (1203bp) protein (401aa)
Response regulator receiver protein Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGN8_9EURY
Response regulator receiver protein {ECO:0000313|EMBL:EET90385.1}; species="Archaea; Parvarchaeota; Candidatus Micrarchaeum.;" source="Candidatus Micrarchaeum acidiphilum ARMAN-2.;"
response regulator receiver modulated diguanylate cyclase
Me_Mat_scaffold_1_9
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists

6786..7790
DNA (1005bp) protein (335aa)
Putative uncharacterized protein Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGN7_9EURY
Putative uncharacterized protein {ECO:0000313|EMBL:EET90384.1}; species="Archaea; Parvarchaeota; Candidatus Micrarchaeum.;" source="Candidatus Micrarchaeum acidiphilum ARMAN-2.;"
Me_Mat_scaffold_1_10
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists

comp(7807..10032)
DNA (2226bp) protein (742aa)
PAS/PAC sensor signal transduction histidine kinase Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGN6_9EURY
PAS/PAC sensor signal transduction histidine kinase {ECO:0000313|EMBL:EET90383.1}; species="Archaea; Parvarchaeota; Candidatus Micrarchaeum.;" source="Candidatus Micrarchaeum acidiphilum ARMAN-2.;"
multi-sensor signal transduction histidine kinase
Me_Mat_scaffold_1_11
unknown

Not on your lists

10108..10410
DNA (303bp) protein (101aa)

This feature has no annotations

Me_Mat_scaffold_1_12
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists


10482..11141
DNA (660bp) protein (220aa)
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00351}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00351};; species="Archaea; Parvarchaeota; Candidatus Micrarchaeum.;" source="Candidatus Micrarchaeum acidiphilum ARMAN-2.;"
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHR8_9EURY
fibrillarin
Me_Mat_scaffold_1_13
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists

11189..12007
DNA (819bp) protein (273aa)
Putative uncharacterized protein Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHR9_9EURY
Putative uncharacterized protein {ECO:0000313|EMBL:EET90171.1}; species="Archaea; Parvarchaeota; Candidatus Micrarchaeum.;" source="Candidatus Micrarchaeum acidiphilum ARMAN-2.;"
Me_Mat_scaffold_1_14

Not on your lists

comp(12009..13733)
DNA (1725bp) protein (575aa)
gltX; glutamate--tRNA ligase (EC:6.1.1.17)
Glutamine--tRNA ligase Tax=mine drainage metagenome RepID=T0YN40_9ZZZZ
Glutamine--tRNA ligase {ECO:0000313|EMBL:EQD36866.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Me_Mat_scaffold_1_15
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists

comp(13758..14375)
DNA (618bp) protein (206aa)
Putative uncharacterized protein Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHS1_9EURY
Putative uncharacterized protein {ECO:0000313|EMBL:EET90173.1}; species="Archaea; Parvarchaeota; Candidatus Micrarchaeum.;" source="Candidatus Micrarchaeum acidiphilum ARMAN-2.;"
Me_Mat_scaffold_1_16
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists

14490..15227
DNA (738bp) protein (246aa)
Peptidyl-prolyl cis-trans isomerase Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHS2_9EURY
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; species="Archaea; Parvarchaeota; Candidatus Micrarchaeum.;" source="Candidatus Micrarchaeum acidiphilum ARMAN-2.;"
Peptidyl-prolyl cis-trans isomerase, FKBP-type rotamase
Me_Mat_scaffold_1_17
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists

comp(15251..15442)
DNA (192bp) protein (64aa)
Transcription elongation factor Spt4 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHS3_9EURY
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; species="Archaea; Parvarchaeota; Candidatus Micrarchaeum.;" source="Candidatus Micrarchaeum acidiphilum ARMAN-2.;"
DNA-directed RNA polymerase, subunit E''
Me_Mat_scaffold_1_18

Not on your lists


comp(15452..16033)
DNA (582bp) protein (194aa)
DNA-directed RNA polymerase subunit E (Fragment) Tax=mine drainage metagenome RepID=T0XTK2_9ZZZZ
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:EQD26106.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
DNA-directed RNA polymerase subunit E'
Me_Mat_scaffold_1_19

Not on your lists

comp(16045..16413)
DNA (369bp) protein (123aa)
Nucleotide binding protein Tax=mine drainage metagenome RepID=T0YY35_9ZZZZ
Nucleotide binding protein {ECO:0000313|EMBL:EQD36862.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Me_Mat_scaffold_1_20
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

16517..17725
DNA (1209bp) protein (403aa)
Major facilitator superfamily MFS_1 Tax=Ferroplasma acidarmanus fer1 RepID=S0AL02_FERAC
major facilitator superfamily MFS_1
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AGO60043.1}; species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
Me_Mat_scaffold_1_21
Paenibacillus sp. oral taxon 786, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17827..19143)
DNA (1317bp) protein (439aa)
FAD dependent oxidoreductase Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IYK1_9BACL
FAD dependent oxidoreductase {ECO:0000313|EMBL:EES74046.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. oral taxon 786 str. D14.;"
glucose-inhibited division protein A
Me_Mat_scaffold_1_22
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists

19239..19652
DNA (414bp) protein (138aa)
CoA-binding domain protein Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHS6_9EURY
CoA-binding domain protein {ECO:0000313|EMBL:EET90178.1}; species="Archaea; Parvarchaeota; Candidatus Micrarchaeum.;" source="Candidatus Micrarchaeum acidiphilum ARMAN-2.;"
coenzyme A-binding protein
Me_Mat_scaffold_1_23
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists

comp(19657..20025)
DNA (369bp) protein (123aa)
Putative uncharacterized protein Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHS8_9EURY
Putative uncharacterized protein {ECO:0000313|EMBL:EET90180.1}; species="Archaea; Parvarchaeota; Candidatus Micrarchaeum.;" source="Candidatus Micrarchaeum acidiphilum ARMAN-2.;"
hypothetical protein
Me_Mat_scaffold_1_24
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists

20223..20597
DNA (375bp) protein (125aa)
Putative uncharacterized protein Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGL8_9EURY
Putative uncharacterized protein {ECO:0000313|EMBL:EET90365.1}; species="Archaea; Parvarchaeota; Candidatus Micrarchaeum.;" source="Candidatus Micrarchaeum acidiphilum ARMAN-2.;"
hypothetical protein
Me_Mat_scaffold_1_25
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists

comp(20609..21319)
DNA (711bp) protein (237aa)
tRNA/rRNA methyltransferase (SpoU) Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGL7_9EURY
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:EET90364.1}; species="Archaea; Parvarchaeota; Candidatus Micrarchaeum.;" source="Candidatus Micrarchaeum acidiphilum ARMAN-2.;"
RNA methyltransferase
Me_Mat_scaffold_1_26

Not on your lists

comp(21337..22080)
DNA (744bp) protein (248aa)
Abortive infection protein Tax=mine drainage metagenome RepID=T0ZNL1_9ZZZZ
Abortive infection protein {ECO:0000313|EMBL:EQD46258.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
CAAX protease self-immunity
Me_Mat_scaffold_1_27

Not on your lists

comp(22080..22253)
DNA (174bp) protein (58aa)
Ribosomal protein S27a domain protein Tax=mine drainage metagenome RepID=T1B007_9ZZZZ
Ribosomal protein S27a domain protein {ECO:0000313|EMBL:EQD46259.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
30S ribosomal protein S27
Me_Mat_scaffold_1_28

Not on your lists

comp(22265..22585)
DNA (321bp) protein (107aa)
30S ribosomal protein S24e (Fragment) Tax=mine drainage metagenome RepID=T1BA28_9ZZZZ
30S ribosomal protein S24e {ECO:0000313|EMBL:EQD51085.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
rps24e; 30S ribosomal protein S24e
Displaying items 1-30 of 46 in total

View Taxonomy