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Montesol18-Sp2_coassembly_scaffold_10468

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Montesol18-Sp2_coassembly_scaffold_10468_1
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..276
DNA (276bp) protein (92aa)
Exodeoxyribonuclease 7 large subunit id=4879791 bin=GWC2_Nitrospirae-rel_56_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
exodeoxyribonuclease VII, large subunit
Tax=RBG_16_Deltaproteobacteria_50_11_curated
Montesol18-Sp2_coassembly_scaffold_10468_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

281..559
DNA (279bp) protein (93aa)
xseB; exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7Q2_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Montesol18-Sp2_coassembly_scaffold_10468_3
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

540..1481
DNA (942bp) protein (314aa)
polyprenyl synthetase
Polyprenyl synthetase {ECO:0000313|EMBL:AJE03183.1}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
Farnesyl-diphosphate synthase id=4370665 bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Montesol18-Sp2_coassembly_scaffold_10468_4
RLO_Nitrospirae_42_9, Nitrospirae, Bacteria

Not on your lists

1531..3438
DNA (1908bp) protein (636aa)
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBM6_9BACT
Tax=RifCSPlowO2_12_Nitrospirae_42_9_curated
Montesol18-Sp2_coassembly_scaffold_10468_5
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3443..4213
DNA (771bp) protein (257aa)
hemolysin
Hemolysin {ECO:0000313|EMBL:AJE03767.1}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
Hemolysin A id=2224804 bin=GWB2_Geobacter-like_52_12 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
Montesol18-Sp2_coassembly_scaffold_10468_6
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

4210..5181
DNA (972bp) protein (324aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8A8J9_THEID
NAD-dependent epimerase/dehydratase
Tax=RBG_16_Nitrospirae_64_22_curated
Montesol18-Sp2_coassembly_scaffold_10468_7
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists

5178..6110
DNA (933bp) protein (311aa)
putative uDP-glucose 4-epimerase (EC:5.1.3.2)
Putative UDP-glucose 4-epimerase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7Q0_9BACT
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
Montesol18-Sp2_coassembly_scaffold_10468_8
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists

6254..7966
DNA (1713bp) protein (571aa)
Predicted ATPases involved in pili biogenesis, PilB homologs id=4847851 bin=GWC2_Nitrospirae-rel_56_14 species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
general secretory pathway protein E
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
Montesol18-Sp2_coassembly_scaffold_10468_9
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists

7968..9191
DNA (1224bp) protein (408aa)
Type II secretion system F domain protein id=4847852 bin=GWC2_Nitrospirae-rel_56_14 species=Desulfovibrio fructosivorans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
type II secretion system protein
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
Montesol18-Sp2_coassembly_scaffold_10468_10
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

9248..10390
DNA (1143bp) protein (381aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HNI9_9FIRM
periplasmic sensor signal transduction histidine kinase
Tax=RBG_16_Nitrospirae_64_22_curated
Montesol18-Sp2_coassembly_scaffold_10468_11
BJP_IG2102_BRC1_58_13, BRC1, Bacteria

Not on your lists

10390..11757
DNA (1368bp) protein (456aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=4948436 bin=GWC2_Nitrospirae_57_13 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
AtoC; response regulator
Tax=BJP_IG2102_BRC1_58_13
Montesol18-Sp2_coassembly_scaffold_10468_12
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists

11933..12325
DNA (393bp) protein (131aa)
hypothetical protein id=4213208 bin=GWA2_OP3_52_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
Montesol18-Sp2_coassembly_scaffold_10468_13
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

12435..12914
DNA (480bp) protein (160aa)
Putative mannose-sensitive hemagglutinin a MshA-like id=4847853 bin=GWC2_Nitrospirae-rel_56_14 species=Herminiimonas arsenicoxydans genus=Herminiimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
fimbrial protein
Tax=GWC2_Nitrospirae_56_14_curated
Montesol18-Sp2_coassembly_scaffold_10468_14
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

13179..13712
DNA (534bp) protein (178aa)
Type II secretion system minor pseudopilin GspH id=4128011 bin=GWF2_Nitrospirae_44_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=RBG_16_Nitrospirae_43_8_curated
Montesol18-Sp2_coassembly_scaffold_10468_15
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13714..14142
DNA (429bp) protein (143aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WL35_9BURK
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:EHR70224.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
Montesol18-Sp2_coassembly_scaffold_10468_16
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

14168..14638
DNA (471bp) protein (157aa)
Putative uncharacterized protein id=4847856 bin=GWC2_Nitrospirae-rel_56_14 species=Aliivibrio salmonicida genus=Aliivibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=GWC2_Nitrospirae_56_14_curated
Montesol18-Sp2_coassembly_scaffold_10468_17
unknown

Not on your lists

14652..15608
DNA (957bp) protein (319aa)

This feature has no annotations

Montesol18-Sp2_coassembly_scaffold_10468_18
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15626..17347
DNA (1722bp) protein (574aa)
Cell wall surface anchor family protein id=4213184 bin=GWA2_OP3_52_12 species=Streptococcus sanguinis genus=Streptococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
hypothetical protein
Tax=GWC2_Deltaproteobacteria_55_46b_curated
Montesol18-Sp2_coassembly_scaffold_10468_19
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17412..17630
DNA (219bp) protein (73aa)
id=3721221 bin=GWF2_Nitrospirae_44_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=RBG_16_Deltaproteobacteria_42_7_curated
Montesol18-Sp2_coassembly_scaffold_10468_20
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17773..18048
DNA (276bp) protein (92aa)
id=2482638 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
Montesol18-Sp2_coassembly_scaffold_10468_21
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

18071..19174
DNA (1104bp) protein (368aa)
Type IV pilus biogenesis ATPase PilM id=3144141 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
type IV pilus assembly protein PilM
Tax=RBG_16_Nitrospirae_64_22_curated
Montesol18-Sp2_coassembly_scaffold_10468_22
unknown

Not on your lists

19205..19804
DNA (600bp) protein (200aa)

This feature has no annotations

Montesol18-Sp2_coassembly_scaffold_10468_23
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19817..20407
DNA (591bp) protein (197aa)
Pilus assembly protein PilO id=2482643 bin=GWC2_Deltaproteobacteria_42_51 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
Montesol18-Sp2_coassembly_scaffold_10468_24
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20443..20835
DNA (393bp) protein (131aa)
id=3982537 bin=GWC2_Deltaproteobacteria_56_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
Tax=GWB2_Deltaproteobacteria_55_19_curated
Montesol18-Sp2_coassembly_scaffold_10468_25
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

20854..22275
DNA (1422bp) protein (474aa)
Type 4 fimbrial biogenesis protein PilQ id=2918354 bin=GWC2_Nitrospirae-rel_56_14 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
Montesol18-Sp2_coassembly_scaffold_10468_26
Sulfurihydrogenibium azorense, Sulfurihydrogenibium, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

22300..22596
DNA (297bp) protein (99aa)
Periplasmic divalent cation tolerance protein n=1 Tax=Sulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825) RepID=C1DWR0_SULAA
periplasmic divalent cation tolerance protein
Periplasmic divalent cation tolerance protein {ECO:0000313|EMBL:ACN98931.1}; TaxID=204536 species="Bacteria; Aquificae; Aquificales; Hydrogenothermaceae; Sulfurihydrogenibium.;" source="Sulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825).;"
Montesol18-Sp2_coassembly_scaffold_10468_27
CG_Delta_01, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22611..23288
DNA (678bp) protein (226aa)
endonuclease
Putative glycosylase id=1717304 bin=GWB2_Nitrospirae_rel_47_37 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=CG_Delta_01
Montesol18-Sp2_coassembly_scaffold_10468_28
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

23484..24398
DNA (915bp) protein (305aa)
Peptidase M23 id=1823423 bin=GWD2_Nitrospirae-related_57_8 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
peptidase M23
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
Montesol18-Sp2_coassembly_scaffold_10468_29
GWA2_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24527..24730
DNA (204bp) protein (68aa)
Cold-shock DNA-binding domain protein n=2 Tax=Veillonellaceae RepID=E2Z9X5_9FIRM
cold-shock DNA-binding domain-containing protein
Tax=GWA2_Deltaproteobacteria_47_9_curated
Montesol18-Sp2_coassembly_scaffold_10468_30
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

24868..27561
DNA (2694bp) protein (898aa)
Protein translocase subunit SecA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAY6_9BACT
secA; preprotein translocase subunit SecA
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Displaying items 1-30 of 63 in total

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