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Montesol18-Sp2_coassembly_scaffold_238067

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Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Montesol18-Sp2_coassembly_scaffold_238067_1
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

1..738
DNA (738bp) protein (246aa)
Elongation factor G n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=EFG_CARHZ
fusA2; elongation factor G
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
Montesol18-Sp2_coassembly_scaffold_238067_2
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists


753..950
DNA (198bp) protein (66aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=4 Tax=Leptospirillum RepID=J9ZCH1_LEPFM
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
Montesol18-Sp2_coassembly_scaffold_238067_3
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

956..1915
DNA (960bp) protein (320aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=EFTU_ANADE
Elongation factor Tu {ECO:0000255|HAMAP-Rule:MF_00118}; Short=EF-Tu {ECO:0000255|HAMAP-Rule:MF_00118};; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
Montesol18-Sp2_coassembly_scaffold_238067_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists


1930..2238
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=4 Tax=Anaeromyxobacter RepID=RS10_ANAD2
rpsJ; 30S ribosomal protein S10
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Montesol18-Sp2_coassembly_scaffold_238067_5
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists


2275..2904
DNA (630bp) protein (210aa)
50S ribosomal protein L3 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCV2_9BACT
rplC; 50S ribosomal protein L3
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
Montesol18-Sp2_coassembly_scaffold_238067_6
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists


2918..3541
DNA (624bp) protein (208aa)
50S ribosomal protein L4 n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3P936_DEFDS
rplD; 50S ribosomal protein L4
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
Montesol18-Sp2_coassembly_scaffold_238067_7
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists


3538..3831
DNA (294bp) protein (98aa)
50S ribosomal protein L23 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCV4_9BACT
rplW; 50S ribosomal protein L23
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Montesol18-Sp2_coassembly_scaffold_238067_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists


3870..4694
DNA (825bp) protein (275aa)
50S ribosomal protein L2 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCV5_9BACT
rplB; 50S ribosomal protein L2
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Montesol18-Sp2_coassembly_scaffold_238067_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists


4707..4994
DNA (288bp) protein (96aa)
30S ribosomal protein S19 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCV6_9BACT
rpsS; 30S ribosomal protein S19
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531, ECO:0000313|EMBL:CBK41065.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Montesol18-Sp2_coassembly_scaffold_238067_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists


5037..5438
DNA (402bp) protein (134aa)
50S ribosomal protein L22 n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2B005
rplV; 50S ribosomal protein L22
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Montesol18-Sp2_coassembly_scaffold_238067_11
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists


5479..6156
DNA (678bp) protein (226aa)
30S ribosomal protein S3 id=4795582 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
rpsC; 30S ribosomal protein S3
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
Montesol18-Sp2_coassembly_scaffold_238067_12
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists


6156..6569
DNA (414bp) protein (138aa)
50S ribosomal protein L16 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCV9_9BACT
rplP; 50S ribosomal protein L16
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Montesol18-Sp2_coassembly_scaffold_238067_13
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists


6569..6781
DNA (213bp) protein (71aa)
50S ribosomal protein L29 n=1 Tax=Eremococcus coleocola ACS-139-V-Col8 RepID=E4KMR4_9LACT
ribosomal protein L29
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
Montesol18-Sp2_coassembly_scaffold_238067_14
S_Thermacetogenium_phaeum_55_64, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


6799..7110
DNA (312bp) protein (104aa)
30S ribosomal protein S17 n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LL87_THEPS
rpsQ; 30S ribosomal protein S17
Tax=S_Thermacetogenium_phaeum_55_64
Montesol18-Sp2_coassembly_scaffold_238067_15
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists


7137..7505
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCW2_9BACT
rplN; 50S ribosomal protein L14
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
Montesol18-Sp2_coassembly_scaffold_238067_16
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7508..7867
DNA (360bp) protein (120aa)
50S ribosomal protein L24 n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=RL24_SYNFM
50S ribosomal protein L24
50S ribosomal protein L24 {ECO:0000255|HAMAP-Rule:MF_01326}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
Montesol18-Sp2_coassembly_scaffold_238067_17
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists


7888..8541
DNA (654bp) protein (218aa)
50S ribosomal protein L5 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCW4_9BACT
rplE; 50S ribosomal protein L5
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Montesol18-Sp2_coassembly_scaffold_238067_18
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


8761..9153
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RS26_9CLOT
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" source="Thermobrachium celere DSM 8682.;"
rpsH; 30S ribosomal protein S8
Montesol18-Sp2_coassembly_scaffold_238067_19
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists


9216..9752
DNA (537bp) protein (179aa)
50S ribosomal protein L6 id=1900179 bin=GWD2_Nitrospirae-related_57_8 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
rplF; 50S ribosomal protein L6
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
Montesol18-Sp2_coassembly_scaffold_238067_20
Thermotoga petrophila, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists


9775..10143
DNA (369bp) protein (123aa)
50S ribosomal protein L18 n=6 Tax=Thermotoga RepID=RL18_THEMA
50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000255|HAMAP-Rule:MF_01337}; TaxID=390874 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995).;"
Montesol18-Sp2_coassembly_scaffold_238067_21
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists


10203..10721
DNA (519bp) protein (173aa)
30S ribosomal protein S5 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCW9_9BACT
rpsE; 30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Montesol18-Sp2_coassembly_scaffold_238067_22
Paenibacillus larvae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


10699..10893
DNA (195bp) protein (65aa)
50S ribosomal protein L30-like protein n=1 Tax=Paenibacillus larvae RepID=UPI0001694009
rpmD; 50S ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00032272}; TaxID=697284 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus larvae subsp. larvae DSM 25430.;"
Montesol18-Sp2_coassembly_scaffold_238067_23
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists


10897..11409
DNA (513bp) protein (171aa)
50S ribosomal protein L15 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCX1_9BACT
rplO; 50S ribosomal protein L15
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
Montesol18-Sp2_coassembly_scaffold_238067_24
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists


11402..12715
DNA (1314bp) protein (438aa)
Protein translocase subunit SecY n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCX2_9BACT
secY; preprotein translocase, membrane subunit SecY
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
Montesol18-Sp2_coassembly_scaffold_238067_25
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

12728..13369
DNA (642bp) protein (214aa)
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCX3_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Montesol18-Sp2_coassembly_scaffold_238067_26
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

13376..14137
DNA (762bp) protein (254aa)
map; methionyl aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCX4_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Montesol18-Sp2_coassembly_scaffold_238067_27
RBG_19FT_COMBO_Nitrospirae_55_12_curated, Nitrospirae, Bacteria

Not on your lists

14144..14362
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Leptospirillum ferrooxidans (strain C2-3) RepID=I0IMW0_LEPFC
translation initiation factor 1
Tax=RBG_19FT_COMBO_Nitrospirae_55_12_curated
Montesol18-Sp2_coassembly_scaffold_238067_28
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


14699..15082
DNA (384bp) protein (128aa)
30S ribosomal protein S13 n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / 104-1A) RepID=C8WTU8_ALIAD
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=521098 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC; 27009 / DSM 446 / JCM 5260 / NBRC 15652 / NCIMB 11725 / NRRL B-14509 /; 104-1A) (Bacillus acidocaldarius).;"
Montesol18-Sp2_coassembly_scaffold_238067_29
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists


15185..15568
DNA (384bp) protein (128aa)
30S ribosomal protein S11 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCX8_9BACT
rpsK; 30S ribosomal protein S11
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Montesol18-Sp2_coassembly_scaffold_238067_30
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists


15594..16220
DNA (627bp) protein (209aa)
30S ribosomal protein S4 id=4627894 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
rpsD; 30S ribosomal protein S4
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Displaying items 1-30 of 49 in total

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