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Montesol18-Sp2_coassembly_scaffold_286290

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Montesol18-Sp2_coassembly_scaffold_286290_1
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

comp(3..1292)
DNA (1290bp) protein (430aa)
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M1P8_GEODF
proton-translocating pyrophosphatase
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
Montesol18-Sp2_coassembly_scaffold_286290_2
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

comp(1365..1937)
DNA (573bp) protein (191aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HR83_9FIRM
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
Montesol18-Sp2_coassembly_scaffold_286290_3
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists


comp(1940..2731)
DNA (792bp) protein (264aa)
50S ribosomal protein L25 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBE0_9BACT
rplY; 50S ribosomal protein L25
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
Montesol18-Sp2_coassembly_scaffold_286290_4
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

comp(2748..3689)
DNA (942bp) protein (314aa)
prsA; ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBD9_9BACT
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
Montesol18-Sp2_coassembly_scaffold_286290_trna_1
unknown

Not on your lists

comp(3761..3831)
DNA (71bp)
transferRNA Gln
Montesol18-Sp2_coassembly_scaffold_286290_5
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

comp(3936..4895)
DNA (960bp) protein (320aa)
4-diphosphocytidyl-2C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=ISPE_PELCD
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
Montesol18-Sp2_coassembly_scaffold_286290_6
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

comp(4944..6383)
DNA (1440bp) protein (480aa)
Transcriptional regulatory protein pilR n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBD7_9BACT
pilR; transcriptional regulatory protein pilR
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
Montesol18-Sp2_coassembly_scaffold_286290_7
RLO_Nitrospirae_42_9, Nitrospirae, Bacteria

Not on your lists

comp(6386..8101)
DNA (1716bp) protein (572aa)
putative sensor protein PilS (EC:2.7.13.3)
Putative Sensor protein PilS n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBD6_9BACT
Tax=RifCSPlowO2_12_Nitrospirae_42_9_curated
Montesol18-Sp2_coassembly_scaffold_286290_8
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

comp(8250..9455)
DNA (1206bp) protein (402aa)
Type IV pilus biogenesis protein PilC n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBD5_9BACT
pilC; type IV pilus biogenesis protein PilC
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
Montesol18-Sp2_coassembly_scaffold_286290_9
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(9476..10582)
DNA (1107bp) protein (369aa)
Twitching motility protein PilT n=2 Tax=Myxococcus xanthus RepID=Q1D099_MYXXD
pilT; twitching motility protein PilT
Tax=RBG_16_Nitrospirae_64_22_curated
Montesol18-Sp2_coassembly_scaffold_286290_10
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(10724..12430)
DNA (1707bp) protein (569aa)
Type IV-A pilus assembly ATPase PilB id=4139314 bin=GWC2_Nitrospirae_57_13 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
type II secretion system protein E
Tax=GWC2_Nitrospirae_57_13_curated
Montesol18-Sp2_coassembly_scaffold_286290_11
Halobacteroides halobius, Halobacteroides, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12519..13373)
DNA (855bp) protein (285aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=748449 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Halobacteroides.;" source="Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1).;"
Shikimate dehydrogenase n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K808_HALHC
shikimate 5-dehydrogenase
Montesol18-Sp2_coassembly_scaffold_286290_12
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists

comp(13424..13960)
DNA (537bp) protein (179aa)
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBD3_9BACT
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
Montesol18-Sp2_coassembly_scaffold_286290_13
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

14152..14463
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBD2_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
Montesol18-Sp2_coassembly_scaffold_286290_14
RBG_16_Nitrospirae_43_11_curated, Nitrospirae, Bacteria

Not on your lists

14533..15315
DNA (783bp) protein (261aa)
PAS/PAC Sensor Hybrid Histidine Kinase n=1 Tax=Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146) RepID=A4CGH4_ROBBH id=5224003 bin=16ft_combo_ws3_JS1 species=Robiginitalea biformata genus=Robiginitalea taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
GAF sensor-containing diguanylate cyclase
Tax=RBG_16_Nitrospirae_43_11_curated
Montesol18-Sp2_coassembly_scaffold_286290_15
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

15394..18144
DNA (2751bp) protein (917aa)
FAD/FMN-containing dehydrogenase, putative glycolate oxidase, fused subunits GlcD and GlcF n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGF7_9BACT
FAD/fMN-containing dehydrogenase subunit GlcDF
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Displaying 16 items

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