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Montesol18-Sp2_coassembly_scaffold_342405

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Montesol18-Sp2_coassembly_scaffold_342405_1
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..1105
-----------------
DNA (1104bp)
protein (368aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JQA4_HYPDA
protein of unknown function
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
Montesol18-Sp2_coassembly_scaffold_342405_2
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

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1211..1696
-----------------
DNA (486bp)
protein (162aa)
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
50S ribosomal protein L21 id=4896199 bin=GWC2_Alphaproteobacteria_42_16 species=Pelagibacterium halotolerans genus=Pelagibacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
50S ribosomal protein L21
Montesol18-Sp2_coassembly_scaffold_342405_3
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1702..1986
-----------------
DNA (285bp)
protein (95aa)
50S ribosomal protein L27 n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=RL27_RHOCS
rpmA; 50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000255|HAMAP-Rule:MF_00539}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Montesol18-Sp2_coassembly_scaffold_342405_4
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2092..3144
-----------------
DNA (1053bp)
protein (351aa)
GTPase Obg n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FUM3_PHAMO
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
obgE; GTPase ObgE
Montesol18-Sp2_coassembly_scaffold_342405_5
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3141..4286
-----------------
DNA (1146bp)
protein (382aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
proB; gamma-glutamyl kinase (EC:2.7.2.11)
Glutamate 5-kinase n=1 Tax=Oceanibaculum indicum P24 RepID=K2IEJ5_9PROT
Montesol18-Sp2_coassembly_scaffold_342405_6
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4283..5569
-----------------
DNA (1287bp)
protein (429aa)
proA; gamma-glutamyl phosphate reductase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Gamma-glutamyl phosphate reductase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ITK8_RHOCS
Montesol18-Sp2_coassembly_scaffold_342405_7
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5679..6110
-----------------
DNA (432bp)
protein (144aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00036DA589
Uncharacterized protein {ECO:0000313|EMBL:EKM98778.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_342405_8
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6181..8601)
-----------------
DNA (2421bp)
protein (807aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Oceanibaculum indicum P24 RepID=K2J4Z4_9PROT
phenylalanyl-tRNA synthetase subunit beta
Montesol18-Sp2_coassembly_scaffold_342405_9
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8612..9694)
-----------------
DNA (1083bp)
protein (361aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FT35_PHAMO
phenylalanyl-tRNA synthetase subunit alpha
Montesol18-Sp2_coassembly_scaffold_342405_10
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9787..10149)
-----------------
DNA (363bp)
protein (121aa)
50S ribosomal protein L20 n=1 Tax=Thalassospira lucentensis RepID=UPI0003B7238C
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
rplT; 50S ribosomal protein L20
Montesol18-Sp2_coassembly_scaffold_342405_11
Acetobacter aceti, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10165..10362)
-----------------
DNA (198bp)
protein (66aa)
50S ribosomal protein L35 n=3 Tax=Acidiphilium RepID=RL35_ACICJ
rpmI; 50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1457393 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; Acetobacter subgen. Acetobacter.;" source="Acetobacter aceti 1023.;"
Montesol18-Sp2_coassembly_scaffold_342405_12
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10656..11114)
-----------------
DNA (459bp)
protein (153aa)
Putative transcriptional regulator, HTH-XRE family n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z4S6_AZOL4
putative transcriptional regulator, HTH-XRE family
Putative transcriptional regulator, HTH-XRE family {ECO:0000313|EMBL:CBS86527.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
Montesol18-Sp2_coassembly_scaffold_342405_13
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11517..11708)
-----------------
DNA (192bp)
protein (64aa)
translation initiation factor IF-3 n=1 Tax=Uliginosibacterium gangwonense RepID=UPI0003829D84
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
Translation initiation factor 3
Montesol18-Sp2_coassembly_scaffold_342405_14
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12119..13999)
-----------------
DNA (1881bp)
protein (627aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
Threonine--tRNA ligase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J4Y6_9PROT
thrS; threonyl-tRNA synthetase
Displaying 14 items

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