ggKbase home page

Montesol18-Sp2_coassembly_scaffold_423454

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Montesol18-Sp2_coassembly_scaffold_423454_1
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

120..1202
-----------------
DNA (1083bp)
protein (361aa)
Luciferase-like monooxygenase n=2 Tax=Rhodococcus RepID=K8Y3S4_RHOOP
Luciferase-like monooxygenase {ECO:0000313|EMBL:EKT84365.1}; TaxID=1129896 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
luciferase
Montesol18-Sp2_coassembly_scaffold_423454_2
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1231..2535)
-----------------
DNA (1305bp)
protein (435aa)
Pentapeptide repeat family protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y274_9PROT
pentapeptide repeat-containing protein
Pentapeptide repeat family protein {ECO:0000313|EMBL:EGY00380.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
Montesol18-Sp2_coassembly_scaffold_423454_3
Paenirhodobacter enshiensis, Paenirhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2603..3904)
-----------------
DNA (1302bp)
protein (434aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1105367 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paenirhodobacter.;" source="Paenirhodobacter enshiensis.;"
DNA polymerase IV n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWY4_PARL1
DNA polymerase IV
Montesol18-Sp2_coassembly_scaffold_423454_4
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3917..4885)
-----------------
DNA (969bp)
protein (323aa)
Dihydrodipicolinate synthetase n=1 Tax=Serratia sp. M24T3 RepID=I0QXM8_9ENTR
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:KJB97528.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
dihydrodipicolinate synthase
Montesol18-Sp2_coassembly_scaffold_423454_5
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4995..5909)
-----------------
DNA (915bp)
protein (305aa)
Polysaccharide deacetylase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZS25_OPITP
polysaccharide deacetylase
Tax=RBG_16_Gamma2_64_10_curated
Montesol18-Sp2_coassembly_scaffold_423454_6
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5906..6970)
-----------------
DNA (1065bp)
protein (355aa)
hypothetical protein
NAD-dependent epimerase/dehydratase id=1747447 bin=GWE2_Gammaproteobacteria_42_36 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_Gammaproteobacteria_42_36 organism_group=Gammaproteobacteria organism_desc=Small but looks good
Tax=RBG_16_Gamma2_64_10_curated
Montesol18-Sp2_coassembly_scaffold_423454_7
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7071..7997)
-----------------
DNA (927bp)
protein (309aa)
Formyl transferase domain protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZS21_OPITP
formyltransferase
Tax=RBG_16_Gamma2_65_34_curated
Montesol18-Sp2_coassembly_scaffold_423454_8
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7978..8967)
-----------------
DNA (990bp)
protein (330aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z7A0_9BACT
UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase
Tax=RBG_16_Gamma2_65_34_curated
Montesol18-Sp2_coassembly_scaffold_423454_9
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8979..10154)
-----------------
DNA (1176bp)
protein (392aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AW15_9BACT
DegT/DnrJ/EryC1/StrS aminotransferase
Tax=RBG_16_Gamma2_65_34_curated
Montesol18-Sp2_coassembly_scaffold_423454_10
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10163..10528)
-----------------
DNA (366bp)
protein (122aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BC27_9BACT
hypothetical protein
Tax=RBG_16_Gamma2_65_34_curated
Montesol18-Sp2_coassembly_scaffold_423454_11
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10525..12222)
-----------------
DNA (1698bp)
protein (566aa)
Dolichyl-phosphate-mannose-protein mannosyltransferase family protein id=1842096 bin=GWD2_Deltaproteobacteria_55_8 species=Rickettsiella grylli genus=Rickettsiella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
glycosyl transferase family protein
Tax=RBG_16_Gamma2_65_34_curated
Montesol18-Sp2_coassembly_scaffold_423454_12
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(12364..13797)
-----------------
DNA (1434bp)
protein (478aa)
hypothetical protein id=14627123 bin=bin7_NC10_sister species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
Montesol18-Sp2_coassembly_scaffold_423454_13
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(13797..14282)
-----------------
DNA (486bp)
protein (162aa)
hypothetical protein; K07794 putative tricarboxylic transport membrane protein id=14627124 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
Montesol18-Sp2_coassembly_scaffold_423454_14
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14338..15306)
-----------------
DNA (969bp)
protein (323aa)
protein bugT id=14627122 bin=bin7_NC10_sister species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
conserved exported hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
Montesol18-Sp2_coassembly_scaffold_423454_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15360..16250)
-----------------
DNA (891bp)
protein (297aa)
Fumarylacetoacetate hydrolase family protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RAW2_9RHIZ
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Montesol18-Sp2_coassembly_scaffold_423454_16
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16415..17083
-----------------
DNA (669bp)
protein (223aa)
GntR family transcriptional regulator n=2 Tax=Xanthobacteraceae RepID=UPI000373CD7E
GntR family transcriptional regulator {ECO:0000313|EMBL:KJB97043.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
GntR family transcriptional regulator
Montesol18-Sp2_coassembly_scaffold_423454_17
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17113..18111)
-----------------
DNA (999bp)
protein (333aa)
beta-lactamase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B5E095
Uncharacterized protein {ECO:0000313|EMBL:ENN85527.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
beta-lactamase domain-containing protein
Montesol18-Sp2_coassembly_scaffold_423454_18
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18136..19221)
-----------------
DNA (1086bp)
protein (362aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036B785E
ATP-binding protein {ECO:0000313|EMBL:KJB95224.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
putative GTPase
Montesol18-Sp2_coassembly_scaffold_423454_19
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(19324..19896)
-----------------
DNA (573bp)
protein (191aa)
Putative kinase inhibitor (YbcL-like) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ALN3_AZOBR
putative kinase inhibitor (YbcL-like)
Tax=BJP_IG2158_Nitrospirales_45_240
Montesol18-Sp2_coassembly_scaffold_423454_20
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20159..21121)
-----------------
DNA (963bp)
protein (321aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI000378EABC
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
Montesol18-Sp2_coassembly_scaffold_423454_21
unknown

Not on your lists

comp(21161..21292)
-----------------
DNA (132bp)
protein (44aa)

This feature has no annotations

Montesol18-Sp2_coassembly_scaffold_423454_22
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21397..21945
-----------------
DNA (549bp)
protein (183aa)
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase n=1 Tax=Sinorhizobium meliloti GR4 RepID=M4IJ58_RHIML
cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:AIC30313.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
Montesol18-Sp2_coassembly_scaffold_423454_23
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22172..22960
-----------------
DNA (789bp)
protein (263aa)
Mercuric reductase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKV3_AFIFE
mercuric reductase
Mercuric reductase {ECO:0000313|EMBL:EKS26823.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
Montesol18-Sp2_coassembly_scaffold_423454_24
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23079..23717
-----------------
DNA (639bp)
protein (213aa)
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
uracil phosphoribosyltransferase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002E914B0
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Montesol18-Sp2_coassembly_scaffold_423454_25
RIFOXYB12_FULL_Gallionellales_54_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26023..26964)
-----------------
DNA (942bp)
protein (314aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SKQ0_9BRAD
Rhs family protein
Tax=RIFOXYB12_FULL_Gallionellales_54_9_curated
Montesol18-Sp2_coassembly_scaffold_423454_26
unknown

Not on your lists

27106..27441
-----------------
DNA (336bp)
protein (112aa)

This feature has no annotations

Montesol18-Sp2_coassembly_scaffold_423454_27
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27548..29107
-----------------
DNA (1560bp)
protein (520aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPZ4_PARL1
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABS61977.1}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Montesol18-Sp2_coassembly_scaffold_423454_28
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29104..32253
-----------------
DNA (3150bp)
protein (1050aa)
CzcA family heavy metal efflux pump n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GXH7_9BRAD
CzcA family heavy metal efflux pump {ECO:0000313|EMBL:ERF82207.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
CzcA family heavy metal efflux protein
Montesol18-Sp2_coassembly_scaffold_423454_29
unknown

Not on your lists

32284..32415
-----------------
DNA (132bp)
protein (44aa)

This feature has no annotations

Montesol18-Sp2_coassembly_scaffold_423454_30
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32507..33472)
-----------------
DNA (966bp)
protein (322aa)
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETR76789.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
Uncharacterized protein id=3709189 bin=GWC2_Syntrophus__56_31 species=Ralstonia sp. PBA genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Displaying items 1-30 of 31 in total

View Taxonomy