ggKbase home page

Montesol18_Sp65_coassembly_scaffold_528142

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Montesol18_Sp65_coassembly_scaffold_528142_1
unknown

Not on your lists

379..630
DNA (252bp) protein (84aa)

This feature has no annotations

Montesol18_Sp65_coassembly_scaffold_528142_2
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

651..1346
DNA (696bp) protein (232aa)
Winged-helix transcriptional response regulator n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q39ZZ1_PELCD
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AJF05620.1}; TaxID=483547 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter subterraneus.;"
Montesol18_Sp65_coassembly_scaffold_528142_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1336..2775
DNA (1440bp) protein (480aa)
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G9G9_GEOUR
Montesol18_Sp65_coassembly_scaffold_528142_4
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

3102..4076
DNA (975bp) protein (325aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHD4_CHLTF
multidrug ABC transporter ATPase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Montesol18_Sp65_coassembly_scaffold_528142_5
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

4160..4954
DNA (795bp) protein (265aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRC6_KORVE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
Montesol18_Sp65_coassembly_scaffold_528142_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

4951..5904
DNA (954bp) protein (318aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRC5_KORVE
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Montesol18_Sp65_coassembly_scaffold_528142_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(6659..7156)
DNA (498bp) protein (166aa)
Biotin carboxyl carrier protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IMJ9_ANADE
Acetyl/propionyl-CoA carboxylase, alpha subunit {ECO:0000313|EMBL:CDM66863.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
biotin/lipoyl attachment protein
Montesol18_Sp65_coassembly_scaffold_528142_8
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(7467..8981)
DNA (1515bp) protein (505aa)
Acetyl-CoA carboxylase, biotin carboxylase id=3942853 bin=GWC2_Proteo_65_14_Ab886 species=Hippea maritima genus=Hippea taxon_order=Desulfurellales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
pyruvate carboxylase subunit A
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
Montesol18_Sp65_coassembly_scaffold_528142_9
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(9113..10579)
DNA (1467bp) protein (489aa)
L-seryl-tRNA selenium transferase (EC:2.9.1.1); K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] id=24455198 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
L-seryl-tRNA selenium transferase (EC:2.9.1.1)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
Montesol18_Sp65_coassembly_scaffold_528142_10
unknown

Not on your lists

comp(10615..10851)
DNA (237bp) protein (79aa)

This feature has no annotations

Montesol18_Sp65_coassembly_scaffold_528142_11

Not on your lists

10926..13070
DNA (2145bp) protein (715aa)
Helicase domain-containing protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T1C8S1_9ZZZZ
Helicase domain-containing protein {ECO:0000313|EMBL:EQD77438.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
SNF2 family DNA/RNA helicase
Montesol18_Sp65_coassembly_scaffold_528142_12
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13107..14540
DNA (1434bp) protein (478aa)
RNA polymerase-associated protein RapA {ECO:0000313|EMBL:EXI84882.1}; EC=3.6.4.- {ECO:0000313|EMBL:EXI84882.1};; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
Superfamily II DNA/RNA helicase, SNF2 family n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LYC9_SYNAS
SNF2 family DNA/RNA helicase
Montesol18_Sp65_coassembly_scaffold_528142_13
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14753..18310
DNA (3558bp) protein (1186aa)
Uncharacterized protein n=1 Tax=Thermus scotoductus (strain ATCC 700910 / SA-01) RepID=E8PLM4_THESS
Uncharacterized protein {ECO:0000313|EMBL:EXI84548.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
adenine-specific DNA methylase containing a Zn-ribbon
Montesol18_Sp65_coassembly_scaffold_528142_14
Mesorhizobium sp. LNJC391B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18541..21978
DNA (3438bp) protein (1146aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00038215F9
Uncharacterized protein {ECO:0000313|EMBL:ESY27443.1}; TaxID=1287273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC391B00.;"
hypothetical protein
Montesol18_Sp65_coassembly_scaffold_528142_15
unknown

Not on your lists

22483..23289
DNA (807bp) protein (269aa)

This feature has no annotations

Montesol18_Sp65_coassembly_scaffold_528142_16
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

23356..24111
DNA (756bp) protein (252aa)
Zinc/iron transporter n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJU3_9BACT
Zinc/iron transporter
Zinc/iron transporter {ECO:0000313|EMBL:CBE67526.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Montesol18_Sp65_coassembly_scaffold_528142_17
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

24145..25002
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000362BC84
4-hydroxybenzoate polyprenyltransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
Montesol18_Sp65_coassembly_scaffold_528142_18
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25396..26907
DNA (1512bp) protein (504aa)
glycosidase (EC:3.2.1.-); K05350 beta-glucosidase [EC:3.2.1.21] id=24521880 bin=RBG_19FT_COMBO_GAL15_69_19 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
Beta-glucosidase B (EC:3.2.1.21)
Beta-glucosidase B {ECO:0000313|EMBL:EAU66469.1}; EC=3.2.1.21 {ECO:0000313|EMBL:EAU66469.1};; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
Montesol18_Sp65_coassembly_scaffold_528142_19
unknown

Not on your lists

comp(26944..27219)
DNA (276bp) protein (92aa)

This feature has no annotations

Montesol18_Sp65_coassembly_scaffold_528142_20
unknown

Not on your lists

comp(27618..28013)
DNA (396bp) protein (132aa)

This feature has no annotations

Montesol18_Sp65_coassembly_scaffold_528142_21
R_WOR_2_68_15, WOR-2, Bacteria

Not on your lists

28459..29127
DNA (669bp) protein (223aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Endonuclease III n=2 Tax=Chloroflexus RepID=A9WG97_CHLAA
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_68_15_curated
Montesol18_Sp65_coassembly_scaffold_528142_22
GWA2_Nitrospirae_42_11_curated, Nitrospirae, Bacteria

Not on your lists

29773..30144
DNA (372bp) protein (124aa)
Tax=GWA2_Nitrospirae_42_11_curated
Montesol18_Sp65_coassembly_scaffold_528142_23
R_NC10_66_22, NC10, Bacteria

Not on your lists

30287..31138
DNA (852bp) protein (284aa)
Hypothetical conserved protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SQ19_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Montesol18_Sp65_coassembly_scaffold_528142_24
unknown

Not on your lists

comp(31230..31745)
DNA (516bp) protein (172aa)
hypothetical protein
Montesol18_Sp65_coassembly_scaffold_528142_25
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32079..33371)
DNA (1293bp) protein (431aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase id=4972247 bin=GWA2_OP3_52_12 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of Montesol18_Sp65_coassembly_scaffolding errors
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
Montesol18_Sp65_coassembly_scaffold_528142_26
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

34381..34857
DNA (477bp) protein (159aa)
putative peroxiredoxin OsmC (EC:1.11.1.15)
Putative Peroxiredoxin OsmC n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PJJ3_9BACT
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
Montesol18_Sp65_coassembly_scaffold_528142_27

Not on your lists

35825..36193
DNA (369bp) protein (123aa)
pyruvate/ketoisovalerate oxidoreductase subunit gamma (EC:1.2.7.1)
Marine sediment metagenome DNA, contig: S06H3_C02454 {ECO:0000313|EMBL:GAH92182.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Pyruvate synthase subunit PorC id=2018539 bin=GWD2_Nitrospirae-related_57_8 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
Displaying 27 items

View Taxonomy