ggKbase home page

RifSed_csp1_19ft_2_scaffold_28223

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_19ft_2_scaffold_28223_1
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

2..388
DNA (387bp) protein (129aa)
Zinc finger protein n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1P7P9_METMZ
Zinc finger protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_19ft_2_scaffold_28223_2
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

475..1023
DNA (549bp) protein (183aa)
Putative signal transduction protein with CBS domains n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GFP6_METPE
signal-transduction protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp1_19ft_2_scaffold_28223_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1066..1839
DNA (774bp) protein (258aa)
CBS domain containing membrane protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMH9_METZD
Putative signal-transduction protein {ECO:0000313|EMBL:KCZ70745.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp1_19ft_2_scaffold_28223_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1847..2782
DNA (936bp) protein (312aa)
Putative signal transduction protein with CBS domains n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMH8_METZD rbh
Putative transcriptional regulator {ECO:0000313|EMBL:KCZ70744.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
putative signal transduction protein with CBS domains rbh
RifSed_csp1_19ft_2_scaffold_28223_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2792..3640
DNA (849bp) protein (283aa)
UPI0003D1C33E related cluster n=1 Tax=unknown RepID=UPI0003D1C33E
Putative transcriptional regulator {ECO:0000313|EMBL:KCZ70743.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
signal transduction protein
RifSed_csp1_19ft_2_scaffold_28223_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3650..4432
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TH71_METAC
CBS-domain-containing membrane protein {ECO:0000313|EMBL:KCZ70742.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp1_19ft_2_scaffold_28223_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4429..4758
DNA (330bp) protein (110aa)
RNA ligase, Pab1020 family {ECO:0000313|EMBL:KCZ70741.1}; EC=6.5.1.1 {ECO:0000313|EMBL:KCZ70741.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ATP-dependent DNA ligase-like protein of eukaryotic ligase III n=2 Tax=Methanosarcina mazei RepID=M1QID7_METMZ
hypothetical protein
Displaying 7 items

View Taxonomy