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RifSed_csp1_19ft_2_scaffold_106614

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_19ft_2_scaffold_106614_1
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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3..794
DNA (792bp) protein (264aa)
ATP-NAD kinase id=2037871 bin=GWB2_Chloroflexi_49_20 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
ATP-NAD/AcoX kinase
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_19ft_2_scaffold_106614_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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887..2083
DNA (1197bp) protein (399aa)
RecA-superfamily ATPase possibly involved in signal transduction n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KTU2_METHD
RecA-superfamily ATPase possibly involved in signal transduction {ECO:0000313|EMBL:KCZ71966.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RecA-superfamily ATPase possibly involved in signal transduction
RifSed_csp1_19ft_2_scaffold_106614_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2256..2525
DNA (270bp) protein (90aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71967.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp1_19ft_2_scaffold_106614_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2522..2827
DNA (306bp) protein (102aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71968.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp1_19ft_2_scaffold_106614_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2820..3185
DNA (366bp) protein (122aa)
UPI0003D1B816 related cluster n=1 Tax=unknown RepID=UPI0003D1B816
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:KCZ71969.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
putative response regulator (CheY-like)
RifSed_csp1_19ft_2_scaffold_106614_6
RBG_16_Planctomycetes_41_13_curated, Planctomycetes, Bacteria

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3182..4501
DNA (1320bp) protein (440aa)
Two-component sensor kinase id=3426331 bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
diguanylate cyclase
Tax=RBG_16_Planctomycetes_41_13_curated
RifSed_csp1_19ft_2_scaffold_106614_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4498..6288
DNA (1791bp) protein (597aa)
Signal transduction histidine kinase {ECO:0000313|EMBL:KCZ73158.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Putative two-component hybrid sensor and regulator id=1929882 bin=GWD2_Deltaproteobacteria_55_8 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
PAS/PAC sensor signal transduction histidine kinase rbh
RifSed_csp1_19ft_2_scaffold_106614_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(6280..6984)
DNA (705bp) protein (235aa)
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BBA9_METIK
Sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:KCZ72357.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
xylose isomerase domain-containing protein
Displaying 8 items

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