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RifSed_csp1_19ft_2_scaffold_128432

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_19ft_2_scaffold_128432_1
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

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comp(86..535)
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KWC1_HALNC
hypothetical protein
Tax=RBG_16_Spirochaetes_49_21_curated
RifSed_csp1_19ft_2_scaffold_128432_2
unknown

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comp(597..716)
DNA (120bp) protein (40aa)

This feature has no annotations

RifSed_csp1_19ft_2_scaffold_128432_3
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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817..1167
DNA (351bp) protein (117aa)
Transcriptional regulator, HxlR family n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E7S3_METEZ
HxlR family transcriptional regulator
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ADI74146.1}; TaxID=644295 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" source="Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303).;"
RifSed_csp1_19ft_2_scaffold_128432_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1188..1976)
DNA (789bp) protein (263aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12VJ3_METBU
Leucyl aminopeptidase (Aminopeptidase T) {ECO:0000313|EMBL:KCZ70354.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp1_19ft_2_scaffold_128432_5

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comp(2041..2568)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8THJ3_METAC
Uncharacterized protein {ECO:0000313|EMBL:KKN27040.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
RifSed_csp1_19ft_2_scaffold_128432_6
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2599..2922)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PRZ6_METMA
Sulfur reduction protein DsrE {ECO:0000313|EMBL:KKH31899.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (Methanosarcina frisia).;"
hypothetical protein
RifSed_csp1_19ft_2_scaffold_128432_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2919..3239)
DNA (321bp) protein (107aa)
Putative transcriptional regulator {ECO:0000313|EMBL:KCZ71318.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ArsR transcriptional regulator; K03892 ArsR family transcriptional regulator id=5041602 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
ArsR family transcriptional regulator
RifSed_csp1_19ft_2_scaffold_128432_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3255..3713)
DNA (459bp) protein (153aa)
Isoprenylcysteine carboxyl methyltransferase (ICMT) family protein {ECO:0000313|EMBL:KCZ71317.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Isoprenylcysteine carboxyl methyltransferase id=4054842 bin=GWF2_Methylomirabilis_70_14 species=Alkaliphilus metalliredigens genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
isoprenylcysteine carboxyl methyltransferase
RifSed_csp1_19ft_2_scaffold_128432_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3747..4046)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003760270
Putative membrane protein {ECO:0000313|EMBL:KCZ71316.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp1_19ft_2_scaffold_128432_10
unknown

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comp(4061..4183)
DNA (123bp) protein (41aa)

This feature has no annotations

Displaying 10 items

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