ggKbase home page

RifSed_csp1_19ft_2_scaffold_15974_2

Organism: RifSed_csp1_19ft_2_Methanoperedens_42_9

partial RP 20 / 55 MC: 2 BSCG 17 / 51 MC: 2 ASCG 17 / 38 MC: 1
Location: 509..1675

Top 3 Functional Annotations

Value Algorithm Source
Radical SAM domain protein n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GHY2_METPE similarity UNIREF
DB: UNIREF100
  • Identity: 54.2
  • Coverage: 378.0
  • Bit_score: 430
  • Evalue 1.10e-117
  • rbh
radical SAM protein similarity KEGG
DB: KEGG
  • Identity: 54.2
  • Coverage: 378.0
  • Bit_score: 430
  • Evalue 3.20e-118
  • rbh
Radical SAM domain protein {ECO:0000313|EMBL:ACL16722.1}; TaxID=521011 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanosphaerula.;" source="Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.2
  • Coverage: 378.0
  • Bit_score: 430
  • Evalue 1.60e-117

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methanosphaerula palustris → Methanosphaerula → Methanomicrobiales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1167
ATGCATACCGTTATGTTTAATAATATGTTATCAGCTGGATTGAGAACCCTTCGAAATCATTTTTATAATCGCATATTCAATCCAGATGTGAAATTCCCAACATATGCTTTCATACTGATAGAAAAAATGTGCAATTCTCGTTGTGGATACTGTGACTTCTGGAAAATGGACCAGGGCAATCAACCATCTAAAGAGGAATGGAAAGCTATTATCGATGATCTGCGGTCTATAGGTTCTGTATCAATAACTTTTAGTGGTGGCGAGCCTTTTTTAAATAGTGATTTATTTGAAATTGCAGCTTATGCCAGATCACGCGGTCTATTGACAATGGTTGTGACAAATTTTAGTCTTTTCAGAGATAGTCATATAGAAAAAGTTTCTAAAAGTTTCGATTTTTTCGGGATTTCTATAGACAGTAACAAACCTGAAGTTTATAAAGAAATAAGGGGAGTTGACTGGTTAGAACGCAATAAGGAAAATATCCGTAAGTTGATGTCTGGATTAGCTGAACGGAAATCCGATACTATAGTATGTGGAATGGTTACTGTATCTAATATAAATGCGCATGAAACACATGAATTACTTCACGTAATTTTTGATGATCTCCAAATGGATACAGTGTCCTATAATCTCTTAGATCCATATTGTGGGGTTTCATCAAAAGATTTTGTACCAACAACAGAACAGATAGAGTATTTCCAAAAAGTGATCTTGGATCATAAAAAAATGTTCCCTATATCCAATAGTATCAGGTATATATCTCAATTGAACAATCTTGACTATAAGTGCAATCCATGGAAGTGCATACAGATAGACAATGAAGGTATCCTTGAAGCACCCTGTCATATTATTGCGGAAAGTAGATTTAACTTACGTGAGCATCGTTTGTCAGAGATATGGAAAGAAGTTCAGACGCAAAAATTACATGAAAAATATTCAAACTGTAAGATGTGTAATTATGGATGCGTAGCAGAAGCCGCTTGGTCAACATATGACTTAGGTTTTGTGATAAACGAAACTTTCCGTGGCATAGCTATCCCAACTTTAAAGCGTATTAAGGCAAGAAATAATAATAATATTAAGAAGTTGGACTGTAAGCTAGAATACCCAAAAATACAGTCCTATGAAAAACTTGTTGAACCTGTATTAACAAATATTCAGAGCTGA
PROTEIN sequence
Length: 389
MHTVMFNNMLSAGLRTLRNHFYNRIFNPDVKFPTYAFILIEKMCNSRCGYCDFWKMDQGNQPSKEEWKAIIDDLRSIGSVSITFSGGEPFLNSDLFEIAAYARSRGLLTMVVTNFSLFRDSHIEKVSKSFDFFGISIDSNKPEVYKEIRGVDWLERNKENIRKLMSGLAERKSDTIVCGMVTVSNINAHETHELLHVIFDDLQMDTVSYNLLDPYCGVSSKDFVPTTEQIEYFQKVILDHKKMFPISNSIRYISQLNNLDYKCNPWKCIQIDNEGILEAPCHIIAESRFNLREHRLSEIWKEVQTQKLHEKYSNCKMCNYGCVAEAAWSTYDLGFVINETFRGIAIPTLKRIKARNNNNIKKLDCKLEYPKIQSYEKLVEPVLTNIQS*