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RifSed_csp1_19ft_2_scaffold_15974

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_19ft_2_scaffold_15974_1
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(2..400)
DNA (399bp) protein (133aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1P8X0_METMZ
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_19ft_2_scaffold_15974_2
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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509..1675
DNA (1167bp) protein (389aa)
Radical SAM domain protein n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GHY2_METPE rbh
radical SAM protein rbh
Radical SAM domain protein {ECO:0000313|EMBL:ACL16722.1}; TaxID=521011 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanosphaerula.;" source="Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c).;"
RifSed_csp1_19ft_2_scaffold_15974_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1711..3000)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TRK4_METAC
Exopolyphosphatase-like enzyme {ECO:0000313|EMBL:KCZ70578.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp1_19ft_2_scaffold_15974_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3429..4427
DNA (999bp) protein (333aa)
RNA 3'-terminal phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200}; Short=RNA cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; Short=RNA-3'-phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; EC=6.5.1.4 {ECO:0000256|HAMAP-Rule:MF_00200};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RNA 3'-terminal-phosphate cyclase (EC:6.5.1.4) rbh
RNA 3'-terminal phosphate cyclase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=RTCA_METBU rbh
RifSed_csp1_19ft_2_scaffold_15974_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(4378..5622)
DNA (1245bp) protein (415aa)
Transposase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MBW3_9EURY rbh
transposase rbh
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_19ft_2_scaffold_15974_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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6328..6465
DNA (138bp) protein (46aa)
Retron-type reverse transcriptase {ECO:0000313|EMBL:KCZ73266.1}; EC=2.7.7.49 {ECO:0000313|EMBL:KCZ73266.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein n=3 Tax=Orenia marismortui RepID=UPI0003726BBE
Displaying 6 items

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