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RifSed_csp1_16ft_2_scaffold_19728

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_16ft_2_scaffold_19728_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2..376)
DNA (375bp) protein (125aa)
Response regulator {ECO:0000313|EMBL:KCZ73330.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Response regulator receiver protein bin=GWB2_Nitrospirae_rel_47_37 species=unknown genus=Magnetococcus taxon_order=Magnetococcales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
pilR; transcriptional regulatory protein pilR
RifSed_csp1_16ft_2_scaffold_19728_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(354..2132)
DNA (1779bp) protein (593aa)
PAS domain S-box {ECO:0000313|EMBL:KCZ73331.1}; EC=2.7.13.3 {ECO:0000313|EMBL:KCZ73331.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
PAS:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A-like bin=GWB2_Nitrospirae_rel_47_37 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
two-component hybrid sensor and regulator
RifSed_csp1_16ft_2_scaffold_19728_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2110..3036)
DNA (927bp) protein (309aa)
Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PQG9_DESSD
Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein {ECO:0000313|EMBL:KCZ73332.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein
RifSed_csp1_16ft_2_scaffold_19728_4
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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3080..4288
DNA (1209bp) protein (403aa)
Molybdenum cofactor biosynthesis protein (MoeA-3) Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O30076_ARCFU
moeA-3; molybdenum cofactor biosynthesis protein A
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_2_scaffold_19728_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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4300..4935
DNA (636bp) protein (212aa)
Tungsten formylmethanofuran dehydrogenase, subunit E (FwdE) Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O30060_ARCFU
fwdE; tungsten formylmethanofuran dehydrogenase subunit E
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_2_scaffold_19728_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5164..5433
DNA (270bp) protein (90aa)
hypothetical protein Tax=Bacillus massiliosenegalensis RepID=UPI0002EFD726
Anaerobic dehydrogenase, typically selenocysteine-containing {ECO:0000313|EMBL:KCZ73339.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
anaerobic dehydrogenase
Displaying 6 items

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