ggKbase home page

RifSed_csp1_16ft_2_scaffold_14905

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_16ft_2_scaffold_14905_1
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

131..520
DNA (390bp) protein (130aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IP51_NITGG
hypothetical protein
Tax=RBG_16_Thaumarchaeota_49_8_curated
RifSed_csp1_16ft_2_scaffold_14905_2

Not on your lists

comp(504..1034)
DNA (531bp) protein (177aa)
hypothetical protein Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI0003780812
Uncharacterized protein {ECO:0000313|EMBL:AIF00995.1}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_140_D09.;"
hypothetical protein
RifSed_csp1_16ft_2_scaffold_14905_3
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(1079..1462)
DNA (384bp) protein (128aa)
Putative uncharacterized protein Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N617_9ARCH
hypothetical protein
Tax=RBG_16_Bathyarchaeota_48_13_curated
RifSed_csp1_16ft_2_scaffold_14905_4
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

1637..1876
DNA (240bp) protein (80aa)
Tax=RBG_16_Thaumarchaeota_49_8_curated
RifSed_csp1_16ft_2_scaffold_14905_5

Not on your lists

1873..2613
DNA (741bp) protein (247aa)
Geranylgeranylglyceryl phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00112}; Short=GGGP synthase {ECO:0000256|HAMAP-Rule:MF_00112};; Short=GGGPS {ECO:0000256|HAMAP-Rule:MF_00112};; EC=2.5.1.41 {ECO:0000256|HAMAP-Rule:MF_00112};; (S)-3-O-geranylgeranylglyceryl phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00112}; Phosphoglycerol geranylgeranyltransferase {ECO:0000256|HAMAP-Rule:MF_00112}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote AD1000_02_C08.;"
phosphoglycerol geranylgeranyltransferase (EC:2.5.1.41)
geranylgeranylglyceryl phosphate synthase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
RifSed_csp1_16ft_2_scaffold_14905_6
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

2627..6058
DNA (3432bp) protein (1144aa)
DNA polymerase II large subunit {ECO:0000256|HAMAP-Rule:MF_00324}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00324};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00324};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
DNA polymerase II large subunit (EC:2.7.7.7)
DNA polymerase II large subunit Tax=Candidatus Nitrososphaera gargensis RepID=K0IK45_NITGG
RifSed_csp1_16ft_2_scaffold_14905_7
CG_Delta_06, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6039..6329)
DNA (291bp) protein (97aa)
Tax=CG_Delta_06
Displaying 7 items

View Taxonomy