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RifSed_csp1_16ft_2_scaffold_37643

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_16ft_2_scaffold_37643_1
unknown

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188..370
DNA (183bp) protein (61aa)

This feature has no annotations

RifSed_csp1_16ft_2_scaffold_37643_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(446..1015)
DNA (570bp) protein (190aa)
Transcriptional regulator, ArsR family Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XNE1_METZD
Putative hydrocarbon binding protein (Contains V4R domain) {ECO:0000313|EMBL:KCZ71208.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ArsR family transcriptional regulator
RifSed_csp1_16ft_2_scaffold_37643_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1076..2095)
DNA (1020bp) protein (340aa)
Signal recognition particle receptor FtsY Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12ZJ8_METBU
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
signal recognition particle-docking protein FtsY
RifSed_csp1_16ft_2_scaffold_37643_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2146..2589)
DNA (444bp) protein (148aa)
Prefoldin subunit alpha Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EC10_METMS
Prefoldin subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; GimC subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
prefoldin, subunit alpha
RifSed_csp1_16ft_2_scaffold_37643_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2586..2786)
DNA (201bp) protein (67aa)
50S ribosomal protein L18Ae Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQ46_METZD
50S ribosomal protein L18Ae {ECO:0000256|HAMAP-Rule:MF_00273}; 50S ribosomal protein L20e {ECO:0000256|HAMAP-Rule:MF_00273}; 50S ribosomal protein LX {ECO:0000256|HAMAP-Rule:MF_00273}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Ribosomal LX protein
RifSed_csp1_16ft_2_scaffold_37643_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2913..3671
DNA (759bp) protein (253aa)
Indole-3-glycerol phosphate synthase {ECO:0000313|EMBL:KCZ71184.1}; EC=4.1.1.48 {ECO:0000313|EMBL:KCZ71184.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
indole-3-glycerol phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12ZK1_METBU
RifSed_csp1_16ft_2_scaffold_37643_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3679..4308
DNA (630bp) protein (210aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12ZK0_METBU
RifSed_csp1_16ft_2_scaffold_37643_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4277..4750
DNA (474bp) protein (158aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Tryptophan synthase beta chain Tax=Methanolobus psychrophilus R15 RepID=K4M8L8_9EURY
tryptophan synthase subunit beta
RifSed_csp1_16ft_2_scaffold_37643_9
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4747..5013
DNA (267bp) protein (89aa)
tryptophan synthase subunit alpha (EC:4.2.1.20)
UPI0003D1AB9B related cluster Tax=unknown RepID=UPI0003D1AB9B
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Displaying 9 items

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