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RifSed_csp1_16ft_2_scaffold_54594

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_16ft_2_scaffold_54594_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3..1232
DNA (1230bp) protein (410aa)
tRNA pseudouridine synthase Pus10 {ECO:0000256|HAMAP-Rule:MF_01893}; EC=5.4.99.- {ECO:0000256|HAMAP-Rule:MF_01893};; tRNA pseudouridine 54/55 synthase {ECO:0000256|HAMAP-Rule:MF_01893}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
tRNA pseudouridine synthase Pus10 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XN18_METZD
THUMP domain-containing protein
RifSed_csp1_16ft_2_scaffold_54594_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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1262..1552
DNA (291bp) protein (97aa)
50S ribosomal protein L21e Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=RL21_METBF
LSU ribosomal protein L21e
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_2_scaffold_54594_3
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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1565..1915
DNA (351bp) protein (117aa)
DNA-directed RNA polymerase subunit F (EC:2.7.7.6)
UPI0003D1B0D0 related cluster Tax=unknown RepID=UPI0003D1B0D0
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_2_scaffold_54594_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1925..2518
DNA (594bp) protein (198aa)
Putative RNA-binding protein Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KYB4_METHD
Putative RNA-binding protein {ECO:0000313|EMBL:KCZ72914.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
putative RNA-binding protein
RifSed_csp1_16ft_2_scaffold_54594_5
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2546..3118
DNA (573bp) protein (191aa)
dimethyladenosine transferase (EC:2.1.1.48)
Probable ribosomal RNA small subunit methyltransferase A Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XN14_METZD
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Displaying 5 items

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