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RifSed_csp1_16ft_2_scaffold_66672

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_16ft_2_scaffold_66672_1
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(2..436)
DNA (435bp) protein (145aa)
porphyrin biosynthesis protein HemD Tax=Laceyella sacchari RepID=UPI0003B416FE
hemD; uroporphyrinogen-III synthase
Tax=RBG_16_Thaumarchaeota_49_8_curated
RifSed_csp1_16ft_2_scaffold_66672_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(412..1185)
DNA (774bp) protein (258aa)
Uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LN72_SYNFM
uroporphyrin-III C-methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
RifSed_csp1_16ft_2_scaffold_66672_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1154..2089)
DNA (936bp) protein (312aa)
hemC; porphobilinogen deaminase (EC:2.5.1.61)
Probable porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Probable porphobilinogen deaminase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INK5_NITGG
RifSed_csp1_16ft_2_scaffold_66672_4
Methanothermobacter sp. CaT2, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(2093..2734)
DNA (642bp) protein (214aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Methanothermobacter sp. CaT2.;"
Glutamate-1-semialdehyde 2,1-aminomutase Tax=Methanothermobacter thermautotrophicus CaT2 RepID=T2GHI1_METTF
glutamate-1-semialdehyde-2,1-aminomutase
RifSed_csp1_16ft_2_scaffold_66672_5

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comp(2787..3365)
DNA (579bp) protein (193aa)
glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000367E42D
Uncharacterized protein {ECO:0000313|EMBL:KKL25962.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
RifSed_csp1_16ft_2_scaffold_66672_6
archaeon Loki, Lokiarchaeota, Archaea

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comp(3366..4319)
DNA (954bp) protein (318aa)
Porphobilinogen synthase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VT04_METIM
Delta-aminolevulinic acid dehydratase {ECO:0000313|EMBL:KKK43098.1}; species="Archaea; Lokiarchaeota; 'Lokiarchaeum'.;" source="archaeon Loki.;"
RifSed_csp1_16ft_2_scaffold_66672_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4345..4827)
DNA (483bp) protein (161aa)
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Glutamyl-tRNA reductase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJD3_NITGG
Displaying 7 items

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