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RifSed_csp1_16ft_2_scaffold_69214

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_16ft_2_scaffold_69214_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1..309
DNA (309bp) protein (103aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72071.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp1_16ft_2_scaffold_69214_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(353..742)
DNA (390bp) protein (130aa)
Putative uncharacterized protein Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAK6_METMS
Uncharacterized protein {ECO:0000313|EMBL:KCZ72070.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp1_16ft_2_scaffold_69214_3
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(747..1490)
DNA (744bp) protein (248aa)
Putative uncharacterized protein Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAK5_METMS
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_2_scaffold_69214_4
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(1544..2338)
DNA (795bp) protein (265aa)
UPI0003D1B0E0 related cluster Tax=unknown RepID=UPI0003D1B0E0
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_2_scaffold_69214_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2345..2686)
DNA (342bp) protein (114aa)
30S ribosomal protein S2 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WLX6_METH6
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291, ECO:0000256|SAAS:SAAS00012212}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
30S ribosomal protein S2P
RifSed_csp1_16ft_2_scaffold_69214_6
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(2704..2868)
DNA (165bp) protein (55aa)
30S ribosomal protein S2 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YZ41_METPS
Suspect SCG annotation. See neighboring gene [RifSed_csp1_16ft_2_scaffold_69214_5].
rps2p; 30S ribosomal protein S2P
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_2_scaffold_69214_7
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2878..3075)
DNA (198bp) protein (66aa)
rpoK; DNA-directed RNA polymerase subunit K (EC:2.7.7.6)
DNA-directed RNA polymerase subunit K Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8IB04_METCZ
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp1_16ft_2_scaffold_69214_trna_1
unknown

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comp(3198..3272)
DNA (75bp)
transferRNA Pro
RifSed_csp1_16ft_2_scaffold_69214_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3464..3862)
DNA (399bp) protein (133aa)
30S ribosomal protein S9 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E7A2_METMS
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003817}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
30S ribosomal protein S9P
RifSed_csp1_16ft_2_scaffold_69214_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3872..4291)
DNA (420bp) protein (140aa)
50S ribosomal protein L13 Tax=Methanolobus psychrophilus R15 RepID=K4MLL7_9EURY
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LSU ribosomal protein L13P
RifSed_csp1_16ft_2_scaffold_69214_10
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(4296..4658)
DNA (363bp) protein (121aa)
50S ribosomal protein L18e Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZF3_METFV
50S ribosomal protein L18ae
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_2_scaffold_69214_11
unknown

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comp(4655..4798)
DNA (144bp) protein (48aa)

This feature has no annotations

RifSed_csp1_16ft_2_scaffold_69214_12
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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4884..5294
DNA (411bp) protein (137aa)
Radical SAM domain protein Tax=Sulfolobus solfataricus RepID=D0KU74_SULS9
radical SAM domain-containing protein
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 13 items

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