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RifSed_csp2_16ft_3_scaffold_21604

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_3_scaffold_21604_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2..559)
DNA (558bp) protein (186aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XUQ5_9FIRM
Signal transduction histidine kinase {ECO:0000313|EMBL:KCZ72818.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
methyl-accepting chemotaxis sensory transducer with Cache sensor
RifSed_csp2_16ft_3_scaffold_21604_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(556..1023)
DNA (468bp) protein (156aa)
Putative uncharacterized protein Tax=uncultured archaeon RepID=D1JAF8_9ARCH
response regulator receiver protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_21604_3
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(1020..1328)
DNA (309bp) protein (103aa)
Putative uncharacterized protein Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAZ5_METMS
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_21604_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1688..3457
DNA (1770bp) protein (590aa)
UvrABC system protein C Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EBR0_METEZ
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
excinuclease ABC subunit C
RifSed_csp2_16ft_3_scaffold_21604_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3452..4177)
DNA (726bp) protein (242aa)
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase {ECO:0000313|EMBL:KCZ71965.1}; EC=3.2.2.- {ECO:0000313|EMBL:KCZ71965.1};; EC=4.2.99.18 {ECO:0000313|EMBL:KCZ71965.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
8-oxoguanine DNA glycosylase Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12WX0_METBU
8-oxoguanine DNA glycosylase-like protein
RifSed_csp2_16ft_3_scaffold_21604_6
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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4358..5494
DNA (1137bp) protein (379aa)
Rhodanese domain protein Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DUV7_DESRL
rhodanese domain-containing protein
Rhodanese domain protein {ECO:0000313|EMBL:AEG61354.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 /; DL).;"
RifSed_csp2_16ft_3_scaffold_21604_7
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5551..6345
DNA (795bp) protein (265aa)
Alpha/beta hydrolase fold protein Tax=Methanosarcina mazei Tuc01 RepID=M1QLX4_METMZ
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:AGF98004.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei Tuc01.;"
RifSed_csp2_16ft_3_scaffold_21604_8
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(6302..6676)
DNA (375bp) protein (125aa)
Tax=BJP_IG2157_Anaerolineales_55_23
RifSed_csp2_16ft_3_scaffold_21604_9
RBG_16_Aminicenantes_66_30_curated, Aminicenantes, Bacteria

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comp(6683..8014)
DNA (1332bp) protein (444aa)
hypothetical protein bin=RBG_16_Aminicenantes_66_30 species=Kribbella catacumbae genus=Kribbella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=RBG_16_Aminicenantes_66_30_curated
Displaying 9 items

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