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RifSed_csp2_16ft_3_scaffold_3935

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_3_scaffold_3935_1
unknown

Not on your lists

comp(1..321)
DNA (321bp) protein (107aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_3935_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

637..900
DNA (264bp) protein (88aa)
Sulfate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00066}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00066};; ATP-sulfurylase {ECO:0000256|HAMAP-Rule:MF_00066}; Sulfate adenylate transferase {ECO:0000256|HAMAP-Rule:MF_00066}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
sulfate adenylyltransferase (EC:2.7.7.4)
Sulfate adenylyltransferase Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8V7_METEZ
RifSed_csp2_16ft_3_scaffold_3935_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

873..1760
DNA (888bp) protein (296aa)
Sulfate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00066}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00066};; ATP-sulfurylase {ECO:0000256|HAMAP-Rule:MF_00066}; Sulfate adenylate transferase {ECO:0000256|HAMAP-Rule:MF_00066}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
sulfate adenylyltransferase (EC:2.7.7.4)
Sulfate adenylyltransferase Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8V7_METEZ
RifSed_csp2_16ft_3_scaffold_3935_4
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1830..2924
DNA (1095bp) protein (365aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_3935_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2926..3519)
DNA (594bp) protein (198aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase glutaminase subunit {ECO:0000256|HAMAP-Rule:MF_01615}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Glutamine amidotransferase subunit PdxT Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=PDXT_METBU
glutamine amidotransferase subunit PdxT
RifSed_csp2_16ft_3_scaffold_3935_6
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

3635..4597
DNA (963bp) protein (321aa)
Cell division protein FtsZ Tax=Candidatus Nitrososphaera gargensis RepID=K0IKP2_NITGG
ftsZ2; cell division protein FtsZ
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_3935_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4618..5322)
DNA (705bp) protein (235aa)
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:KCZ72710.1}; EC=4.2.1.75 {ECO:0000313|EMBL:KCZ72710.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Uroporphyrinogen III synthase HEM4 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMW6_METZD
uroporphyrinogen III synthase HEM4
RifSed_csp2_16ft_3_scaffold_3935_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5414..5965)
DNA (552bp) protein (184aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71534.1}; Flags: Precursor;; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_3935_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6238..7314
DNA (1077bp) protein (359aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ73263.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp2_16ft_3_scaffold_3935_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7343..7804
DNA (462bp) protein (154aa)
Riboflavin synthase {ECO:0000256|PIRNR:PIRNR015750}; EC=2.5.1.9 {ECO:0000256|PIRNR:PIRNR015750};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Riboflavin synthase Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HDQ2_METFS
riboflavin synthase
RifSed_csp2_16ft_3_scaffold_3935_11
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7813..8121
DNA (309bp) protein (103aa)
Putative uncharacterized protein bin=GWF2_Lentisphaerae_49_21 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
cupin 2 domain-containing protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_3935_12
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(8123..9004)
DNA (882bp) protein (294aa)
Bifunctional protein FolD Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KYF2_METHD
5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_3935_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9014..10249)
DNA (1236bp) protein (412aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
glycine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMS5_METZD
RifSed_csp2_16ft_3_scaffold_3935_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10263..10868)
DNA (606bp) protein (202aa)
Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase {ECO:0000313|EMBL:KCZ70369.1}; EC=2.1.2.2 {ECO:0000313|EMBL:KCZ70369.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UPI0003D1A988 related cluster Tax=unknown RepID=UPI0003D1A988
phosphoribosylglycinamide formyltransferase
RifSed_csp2_16ft_3_scaffold_3935_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11191..11502
DNA (312bp) protein (104aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70370.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp2_16ft_3_scaffold_3935_16
unknown

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11569..11727
DNA (159bp) protein (53aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_3935_17

Not on your lists

comp(11772..14474)
DNA (2703bp) protein (901aa)
Putative uncharacterized protein Tax=uncultured archaeon RepID=D1JFL4_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH37322.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_3935_18

Not on your lists

comp(14471..14773)
DNA (303bp) protein (101aa)
Putative uncharacterized protein Tax=uncultured archaeon RepID=D1JFL4_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH37322.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
KAP family P-loop domain protein
RifSed_csp2_16ft_3_scaffold_3935_19
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(14965..15207)
DNA (243bp) protein (81aa)
hypothetical protein
id=5103333 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
RifSed_csp2_16ft_3_scaffold_3935_20
unknown

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comp(15212..15451)
DNA (240bp) protein (80aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_3935_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15767..16594)
DNA (828bp) protein (276aa)
1,4-dihydroxy-6-naphtoate synthase {ECO:0000256|HAMAP-Rule:MF_00996}; EC=4.1.-.- {ECO:0000256|HAMAP-Rule:MF_00996};; Menaquinone biosynthetic enzyme MqnD {ECO:0000256|HAMAP-Rule:MF_00996}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Putative uncharacterized protein bin=GWF2_Nitrospirae_44_13 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
RifSed_csp2_16ft_3_scaffold_3935_22
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16591..17289)
DNA (699bp) protein (233aa)
Futalosine hydrolase {ECO:0000313|EMBL:KCZ71558.1}; EC=3.2.2.26 {ECO:0000313|EMBL:KCZ71558.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Futalosine nucleosidase bin=GWC2_CP_Nitrospirae-rel_42_7 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
futalosine nucleosidase
RifSed_csp2_16ft_3_scaffold_3935_23
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(17350..19230)
DNA (1881bp) protein (627aa)
Multi-sensor hybrid histidine kinase Tax=Methanolobus psychrophilus R15 RepID=K4MJA7_9EURY
multi-sensor hybrid histidine kinase
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_3935_24
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

19316..20251
DNA (936bp) protein (312aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_3935_25
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(20245..21036)
DNA (792bp) protein (264aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_3935_26
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(21038..21481)
DNA (444bp) protein (148aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_3935_27
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(21485..30451)
DNA (8967bp) protein (2989aa)
Uncharacterized protein Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S3L0_FERPA
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_3935_28
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(31003..31707)
DNA (705bp) protein (235aa)
Putative uncharacterized protein C3_0040 Tax=uncultured archaeon RepID=Q2Y4D3_9ARCH
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_3935_29
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(31779..32405)
DNA (627bp) protein (209aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_3935_30
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(32488..33078)
DNA (591bp) protein (197aa)
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Displaying items 1-30 of 31 in total

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