ggKbase home page

RifSed_csp2_16ft_3_scaffold_27753

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_3_scaffold_27753_1
unknown

Not on your lists

2..139
DNA (138bp) protein (46aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_27753_2
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

Not on your lists

218..769
DNA (552bp) protein (184aa)
DNA polymerase Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI00037E0311
ferritin Dps-like family protein
Tax=Caldatribacterium californiense
RifSed_csp2_16ft_3_scaffold_27753_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

784..2853
DNA (2070bp) protein (690aa)
Thioredoxin domain-containing protein {ECO:0000313|EMBL:KCZ71535.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
thioredoxin domain protein bin=bin1_lowGC species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
RifSed_csp2_16ft_3_scaffold_27753_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2861..3649
DNA (789bp) protein (263aa)
dihydroorotate dehydrogenase Tax=Aminicenantes bacterium SCGC AAA252-K06 RepID=UPI0003B41BE5
Putative divalent heavy-metal cations transporter {ECO:0000313|EMBL:KCZ70855.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
zinc/iron permease
RifSed_csp2_16ft_3_scaffold_27753_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(3653..3868)
DNA (216bp) protein (72aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_27753_6
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

4064..4852
DNA (789bp) protein (263aa)
hypothetical protein Tax=Brevibacillus sp. phR RepID=UPI0002EEEA1C
ABC transporter-like protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_27753_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4823..6160)
DNA (1338bp) protein (446aa)
Uncharacterized protein Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AHD7_PYRYC
Putative GTPase {ECO:0000313|EMBL:KCZ72227.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_27753_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6208..6720)
DNA (513bp) protein (171aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
thrB; homoserine kinase (EC:2.7.1.39)
Homoserine kinase Tax=Uncultured methanogenic archaeon RC-I RepID=KHSE_UNCMA
Displaying 8 items

View Taxonomy