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RifSed_csp2_16ft_3_scaffold_5082

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_3_scaffold_5082_1
RBG_16_OP11_Levybacteria_35_11_curated, Levybacteria, Microgenomates, Bacteria

Not on your lists

166..783
DNA (618bp) protein (206aa)
Tax=RBG_16_OP11_Levybacteria_35_11_curated
RifSed_csp2_16ft_3_scaffold_5082_2
unknown

Not on your lists

comp(761..982)
DNA (222bp) protein (74aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_5082_3
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1181..1444
DNA (264bp) protein (88aa)
Uncharacterized protein Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4C0I6_METCG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB67997.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC; 103675 / OCM 69 / GP-6) (Methanothrix concilii).;"
RifSed_csp2_16ft_3_scaffold_5082_4
unknown

Not on your lists

comp(1401..1544)
DNA (144bp) protein (48aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_5082_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1622..1777
DNA (156bp) protein (52aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70441.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp2_16ft_3_scaffold_5082_6
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2556..3185)
DNA (630bp) protein (210aa)
Uncharacterized protein Tax=Prevotella sp. CAG:279 RepID=R7HJV4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE39924.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:279.;"
RifSed_csp2_16ft_3_scaffold_5082_7
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3146..3553)
DNA (408bp) protein (136aa)
Uncharacterized protein Tax=Bradyrhizobium sp. ORS 375 RepID=H0SBZ7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD91724.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
RifSed_csp2_16ft_3_scaffold_5082_8
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(4013..4252)
DNA (240bp) protein (80aa)
hypothetical protein Tax=Sulfurovum sp. SCGC AAA036-F05 RepID=UPI00037EEA46
plasmid stabilization system protein
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp2_16ft_3_scaffold_5082_9
unknown

Not on your lists

comp(4673..4954)
DNA (282bp) protein (94aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_5082_10
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4902..5237)
DNA (336bp) protein (112aa)
Uncharacterized protein {ECO:0000313|EMBL:AKB60706.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei SarPi.;"
RifSed_csp2_16ft_3_scaffold_5082_11
unknown

Not on your lists

5680..5823
DNA (144bp) protein (48aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_5082_12
unknown

Not on your lists

5877..6020
DNA (144bp) protein (48aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_5082_13
unknown

Not on your lists

6609..6779
DNA (171bp) protein (57aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_5082_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7828..8418)
DNA (591bp) protein (197aa)
CRISPR-associated protein Cas4 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HIN3_METFS
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:KCZ73129.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
CRISPR-associated protein Cas4
RifSed_csp2_16ft_3_scaffold_5082_15
RBG_16_OP11_Levybacteria_35_11_curated, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(8431..8724)
DNA (294bp) protein (98aa)
CRISPR-associated endoribonuclease Cas2 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HJB9_METFS
CRISPR-associated endoribonuclease Cas2
Tax=RBG_16_OP11_Levybacteria_35_11_curated
RifSed_csp2_16ft_3_scaffold_5082_16
RBG_16_OP11_Levybacteria_35_11_curated, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(8735..9484)
DNA (750bp) protein (250aa)
CRISPR-associated endonuclease Cas1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HGN5_METFS
CRISPR-associated endonuclease Cas1
Tax=RBG_16_OP11_Levybacteria_35_11_curated
RifSed_csp2_16ft_3_scaffold_5082_17
RBG_16_OP11_Levybacteria_35_11_curated, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(9432..9677)
DNA (246bp) protein (82aa)
CRISPR-associated endonuclease Cas1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HGN5_METFS
CRISPR-associated endonuclease Cas1
Tax=RBG_16_OP11_Levybacteria_35_11_curated
RifSed_csp2_16ft_3_scaffold_5082_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9679..10059)
DNA (381bp) protein (127aa)
Putative uncharacterized protein Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BAG6_METIK
Uncharacterized protein {ECO:0000313|EMBL:KCZ73132.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_5082_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10028..10456)
DNA (429bp) protein (143aa)
Uncharacterized protein Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LJ13_THEBM
Putative nucleotidyltransferase {ECO:0000313|EMBL:KCZ73133.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_5082_20
RBG_16_OP11_Levybacteria_35_11_curated, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(10446..10832)
DNA (387bp) protein (129aa)
Uncharacterized protein Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HHC4_METFS
hypothetical protein
Tax=RBG_16_OP11_Levybacteria_35_11_curated
RifSed_csp2_16ft_3_scaffold_5082_21
RBG_16_OP11_Levybacteria_35_11_curated, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(11007..11318)
DNA (312bp) protein (104aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Thermococcus kodakarensis genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RBG_16_OP11_Levybacteria_35_11_curated
RifSed_csp2_16ft_3_scaffold_5082_22
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(11324..11767)
DNA (444bp) protein (148aa)
Nucleotidyltransferase Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=C6A3T3_THESM
Nucleotidyltransferase
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_5082_23
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11811..12068)
DNA (258bp) protein (86aa)
Uncharacterized protein Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HHC4_METFS
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_5082_24
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists

comp(12386..15127)
DNA (2742bp) protein (914aa)
CRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HEM1_METFS
CRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD
Tax=Altiarchaeum hamiconexum
RifSed_csp2_16ft_3_scaffold_5082_25
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15129..15863)
DNA (735bp) protein (245aa)
CRISPR-associated protein Cas5 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HIP2_METFS
CRISPR-associated protein Cas5
CRISPR-associated protein Cas5 {ECO:0000313|EMBL:AGB03158.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
RifSed_csp2_16ft_3_scaffold_5082_26
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15908..16225)
DNA (318bp) protein (106aa)
CRISPR-associated protein Cas7/Csh2, subtype I-B/HMARI Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HJD7_METFS
CRISPR-associated protein Cas7/Csh2, subtype I-B/HMARI
CRISPR-associated protein Cas7/Csh2, subtype I-B/HMARI {ECO:0000313|EMBL:AGB03159.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
RifSed_csp2_16ft_3_scaffold_5082_27
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16259..16864)
DNA (606bp) protein (202aa)
CRISPR-associated protein Cas7/Csh2, subtype I-B/HMARI Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HJD7_METFS
CRISPR-associated protein Cas7/Csh2, subtype I-B/HMARI
CRISPR-associated protein Cas7/Csh2, subtype I-B/HMARI {ECO:0000313|EMBL:AGB03159.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
RifSed_csp2_16ft_3_scaffold_5082_28
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists

comp(16857..18992)
DNA (2136bp) protein (712aa)
CRISPR-associated protein, TM1802 family Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HGP1_METFS
CRISPR-associated protein, TM1802 family
Tax=Altiarchaeum hamiconexum
RifSed_csp2_16ft_3_scaffold_5082_29
RBG_16_OP11_Levybacteria_35_11_curated, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(18999..19313)
DNA (315bp) protein (105aa)
Tax=RBG_16_OP11_Levybacteria_35_11_curated
RifSed_csp2_16ft_3_scaffold_5082_30
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19332..20210)
DNA (879bp) protein (293aa)
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:KCZ72640.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Cation efflux family protein bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
cation diffusion facilitator family transporter
Displaying items 1-30 of 38 in total

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