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RifSed_csp2_16ft_3_scaffold_8292

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_3_scaffold_8292_1
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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418..1044
DNA (627bp) protein (209aa)
Putative transcription regulator (ArsR family) Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W6B7_UNCMA
ArsR family transcriptional regulator
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_8292_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1059..1553
DNA (495bp) protein (165aa)
Molecular chaperone (Small heat shock protein) Tax=uncultured Acidilobus sp. CIS RepID=V4J7H3_9CREN
Molecular chaperone (Small heat shock protein) {ECO:0000313|EMBL:KCZ72075.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
small heat shock protein (hsp20-1)
RifSed_csp2_16ft_3_scaffold_8292_3
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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1589..3772
DNA (2184bp) protein (728aa)
AAA family ATPase, CDC48 subfamily protein (EC:3.6.4.6)
AAA family ATPase, CDC48 subfamily Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B6J8_METTP
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_8292_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3828..6047
DNA (2220bp) protein (740aa)
Cell division control protein 48 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8THE2_METAC
AAA family ATPase, CDC48 subfamily {ECO:0000313|EMBL:KCZ71917.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
cdc48; cell division control protein 48
RifSed_csp2_16ft_3_scaffold_8292_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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6044..6469
DNA (426bp) protein (142aa)
Molecular chaperone (Small heat shock protein) {ECO:0000313|EMBL:KCZ71918.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hsp20b; heat shock protein bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
hsp20-2; chaperonin Hsp20
RifSed_csp2_16ft_3_scaffold_8292_6
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(6478..8196)
DNA (1719bp) protein (573aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides methylutens MM1.;"
adenine deaminase (EC:3.5.4.2)
Adenine deaminase Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=ADEC_METBU
RifSed_csp2_16ft_3_scaffold_8292_7
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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8323..9504
DNA (1182bp) protein (394aa)
hypothetical protein Tax=Methylobacter marinus RepID=UPI000374CB81
cytochrome c peroxidase
Cytochrome c peroxidase family protein {ECO:0000313|EMBL:AAU92239.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
RifSed_csp2_16ft_3_scaffold_8292_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(9543..11600)
DNA (2058bp) protein (686aa)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
V-type H(+)-translocating pyrophosphatase (EC:3.6.1.1)
K(+)-insensitive pyrophosphate-energized proton pump Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XM87_METZD
RifSed_csp2_16ft_3_scaffold_8292_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(11672..12781)
DNA (1110bp) protein (370aa)
ATPase, AAA family Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TLK7_METAC
Putative ATPase (AAA+ superfamily) {ECO:0000313|EMBL:KCZ72035.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ATPase AAA
RifSed_csp2_16ft_3_scaffold_8292_10
unknown

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comp(12815..12883)
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 10 items

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