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RifSed_csp2_16ft_3_scaffold_1008

Search features with annotation key words

Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_3_scaffold_1008_1
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

3..302
DNA (300bp) protein (100aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_1008_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

343..636
DNA (294bp) protein (98aa)
Uncharacterized protein Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W758_UNCMA
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_1008_3
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

624..1232
DNA (609bp) protein (203aa)
UPI0003D1BE3B related cluster Tax=unknown RepID=UPI0003D1BE3B
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_1008_4
unknown

Not on your lists

1308..1421
DNA (114bp) protein (38aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_1008_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1652..2176
DNA (525bp) protein (175aa)
Alpha-ribazole-phosphate phosphatase Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12UB1_METBU
Alpha-ribazole phosphatase CobZ {ECO:0000313|EMBL:KCZ72563.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_1008_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2169..2930
DNA (762bp) protein (254aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Cobalamin synthase Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E6A8_METEZ
cobalamin 5'-phosphate synthase
RifSed_csp2_16ft_3_scaffold_1008_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2915..3553
DNA (639bp) protein (213aa)
4-diphosphocytidyl-2C-methyl-D-erythritol synthase Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E6A7_METEZ
GTP:adenosylcobinamide-phosphate guanylyltransferase {ECO:0000313|EMBL:KCZ72565.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
4-diphosphocytidyl-2C-methyl-D-erythritol synthase
RifSed_csp2_16ft_3_scaffold_1008_8
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

3546..3716
DNA (171bp) protein (57aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_1008_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3703..4887
DNA (1185bp) protein (395aa)
Radical SAM additional 4Fe4S-binding domain protein Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BMY6_9EURY
Radical SAM additional 4Fe4S-binding domain {ECO:0000313|EMBL:KCZ72862.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
radical SAM additional 4Fe4S-binding domain protein
RifSed_csp2_16ft_3_scaffold_1008_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4882..5490)
DNA (609bp) protein (203aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72924.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp2_16ft_3_scaffold_1008_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5545..5922)
DNA (378bp) protein (126aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72923.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp2_16ft_3_scaffold_1008_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6157..7212
DNA (1056bp) protein (352aa)
Nitrate ABC transporter, ATP-binding protein, putative Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O29615_ARCFU
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:KCZ72819.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
nitrate ABC transporter ATP-binding protein
RifSed_csp2_16ft_3_scaffold_1008_13
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7216..7710
DNA (495bp) protein (165aa)
Predicted phosphoesterase Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TXA6_METKA
phosphoesterase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_1008_14
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7751..8284
DNA (534bp) protein (178aa)
Methanogen homoaconitase small subunit Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XPX4_METZD
3-isopropylmalate dehydratase small subunit
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_1008_15
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8281..9144
DNA (864bp) protein (288aa)
Conserved protein Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PZ50_METMA
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_1008_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9146..10129
DNA (984bp) protein (328aa)
Isopropylmalate/isohomocitrate dehydrogenase {ECO:0000313|EMBL:KCZ72144.1}; EC=1.1.1.- {ECO:0000313|EMBL:KCZ72144.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Isopropylmalate/isohomocitrate dehydrogenase Tax=Methanolobus psychrophilus R15 RepID=K4MRZ4_9EURY
isopropylmalate/isohomocitrate dehydrogenase
RifSed_csp2_16ft_3_scaffold_1008_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10112..11089)
DNA (978bp) protein (326aa)
Phosphate transporter Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAM5_METMS
Phosphate/sulfate permease {ECO:0000313|EMBL:KCZ72143.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
phosphate transporter
RifSed_csp2_16ft_3_scaffold_1008_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11154..11882)
DNA (729bp) protein (243aa)
Uncharacterized protein Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMC3_METZD
Uncharacterized protein {ECO:0000313|EMBL:KCZ72142.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_1008_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11913..12206)
DNA (294bp) protein (98aa)
Putative uncharacterized protein C4_0010 Tax=uncultured archaeon RepID=Q2Y4S3_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KCZ72141.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
PRC-barrel protein
RifSed_csp2_16ft_3_scaffold_1008_20
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12706..12876)
DNA (171bp) protein (57aa)
id=4168195 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
RifSed_csp2_16ft_3_scaffold_1008_21

Not on your lists

comp(13015..13902)
DNA (888bp) protein (296aa)
nuclease Tax=Methylohalobius crimeensis RepID=UPI0003B46445
Putative uncharacterized protein {ECO:0000313|EMBL:CBH37807.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
nuclease
RifSed_csp2_16ft_3_scaffold_1008_22
unknown

Not on your lists

comp(14005..14157)
DNA (153bp) protein (51aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_1008_23
RLO_PLX_64_10, Bacteria

Not on your lists

14352..14465
DNA (114bp) protein (38aa)
Putative uncharacterized protein Tax=uncultured archaeon RepID=D1JJ34_9ARCH
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
RifSed_csp2_16ft_3_scaffold_1008_24
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14798..15169)
DNA (372bp) protein (124aa)
Putative uncharacterized protein Tax=uncultured Desulfobacterium sp. RepID=E1YM88_9DELT
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_1008_25
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15166..15396)
DNA (231bp) protein (77aa)
Putative uncharacterized protein Tax=uncultured Desulfobacterium sp. RepID=E1YM87_9DELT
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_1008_26
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15807..17015
DNA (1209bp) protein (403aa)
Uncharacterized protein Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RWL8_FERPA
Uncharacterized protein {ECO:0000313|EMBL:KCZ70387.1}; Flags: Precursor;; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_1008_27
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

17054..17608
DNA (555bp) protein (185aa)
CBS domain containing membrane protein bin=GWF2_Nitrospirae_44_13 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
CBS-domain-containing membrane protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_1008_28
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

17605..18156
DNA (552bp) protein (184aa)
CBS-domain-containing membrane protein Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NC41_DESSD
CBS-domain-containing membrane protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_1008_29
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

18213..20084
DNA (1872bp) protein (624aa)
Carbon-monoxide dehydrogenase, catalytic subunit Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W7R0_DESOD
carbon-monoxide dehydrogenase, catalytic subunit
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_1008_30
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20279..20776)
DNA (498bp) protein (166aa)
Rubredoxin-type Fe(Cys)4 protein Tax=Methanoregula boonei (strain 6A8) RepID=A7I6I8_METB6
Ferredoxin-thioredoxin reductase, catalytic subunit {ECO:0000313|EMBL:KCZ72451.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
rubredoxin-type Fe(Cys)4 protein
Displaying items 1-30 of 74 in total

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