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RifSed_csp1_16ft_3_scaffold_23187

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_16ft_3_scaffold_23187_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1..2106
DNA (2106bp) protein (702aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
DNA-directed RNA polymerase Tax=Methanosarcina mazei RepID=M1QBN4_METMZ
RifSed_csp1_16ft_3_scaffold_23187_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2103..3248
DNA (1146bp) protein (382aa)
DNA-directed RNA polymerase subunit A'' {ECO:0000256|HAMAP-Rule:MF_00411}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00411};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6)
DNA-directed RNA polymerase, subunit A Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q464Y8_METBF
RifSed_csp1_16ft_3_scaffold_23187_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3260..3553
DNA (294bp) protein (98aa)
50S ribosomal protein L30e Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BCI8_9EURY
Ribosomal protein L30E {ECO:0000313|EMBL:KCZ72736.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LSU ribosomal protein L30E
RifSed_csp1_16ft_3_scaffold_23187_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3546..3977
DNA (432bp) protein (144aa)
Transcription termination factor NusA Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WMA7_METH6
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Transcription termination factor NusA
RifSed_csp1_16ft_3_scaffold_23187_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3996..4424
DNA (429bp) protein (143aa)
30S ribosomal protein S12 Tax=Methanolobus psychrophilus R15 RepID=K4MM22_9EURY
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
30S ribosomal protein S12P
RifSed_csp1_16ft_3_scaffold_23187_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4426..4572
DNA (147bp) protein (49aa)
30S ribosomal protein S7 Tax=Methanosarcina mazei Tuc01 RepID=M1PAT0_METMZ
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SSU ribosomal protein S5e (S7p)
Displaying 6 items

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