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RifSed_csp1_16ft_3_scaffold_6627

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_16ft_3_scaffold_6627_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1..582
DNA (582bp) protein (194aa)
DNA primase small subunit PriS {ECO:0000256|HAMAP-Rule:MF_00700, ECO:0000256|SAAS:SAAS00011001}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00700, ECO:0000256|SAAS:SAAS00044138};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
DNA primase small subunit (EC:2.7.7.-)
DNA primase small subunit PriS Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E7Q9_METMS
RifSed_csp1_16ft_3_scaffold_6627_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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575..1216
DNA (642bp) protein (214aa)
Putative uncharacterized protein Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E7R0_METMS
Uncharacterized protein {ECO:0000313|EMBL:KCZ71963.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp1_16ft_3_scaffold_6627_3
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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1509..1682
DNA (174bp) protein (58aa)
30S ribosomal protein S27e Tax=Methanolobus psychrophilus R15 RepID=K4MMX8_9EURY
30S ribosomal protein S27e
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_3_scaffold_6627_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1682..2476
DNA (795bp) protein (265aa)
Protein translation initiation factor 2 subunit alpha Tax=Methanosarcina mazei RepID=Q8PVZ7_METMA
Translation initiation factor 2, alpha subunit (EIF-2alpha) {ECO:0000313|EMBL:KCZ71960.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
translation initiation factor IF-2 subunit alpha
RifSed_csp1_16ft_3_scaffold_6627_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2648..3409
DNA (762bp) protein (254aa)
Uncharacterized protein Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B682_METTP
TIGR00162 family protein {ECO:0000313|EMBL:KCZ71959.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp1_16ft_3_scaffold_6627_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3417..4052
DNA (636bp) protein (212aa)
hypothetical protein Tax=Nitrospina sp. AB-629-B06 RepID=UPI0003774E0D
Methyltransferase family protein {ECO:0000313|EMBL:KCZ71958.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
type 12 methyltransferase
RifSed_csp1_16ft_3_scaffold_6627_7
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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4069..4341
DNA (273bp) protein (91aa)
Large-conductance mechanosensitive channel Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HEH7_METFS
large-conductance mechanosensitive channel
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_3_scaffold_6627_8
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(4343..5638)
DNA (1296bp) protein (432aa)
Putative uncharacterized protein Tax=uncultured archaeon RepID=D1JF96_9ARCH
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_3_scaffold_6627_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5702..6277)
DNA (576bp) protein (192aa)
Uncharacterized protein Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GHP5_METPE
Uncharacterized protein {ECO:0000313|EMBL:KCZ72012.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp1_16ft_3_scaffold_6627_trna_1
unknown

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comp(6550..6621)
DNA (72bp)
transferRNA Ala
RifSed_csp1_16ft_3_scaffold_6627_10
RBG_16_OP11_Levybacteria_35_11_curated, Levybacteria, Microgenomates, Bacteria

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comp(6672..6989)
DNA (318bp) protein (106aa)
Uncharacterized protein Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMM5_METZD
hypothetical protein
Tax=RBG_16_OP11_Levybacteria_35_11_curated
RifSed_csp1_16ft_3_scaffold_6627_11
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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7166..8806
DNA (1641bp) protein (547aa)
PAS domain S-box Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HJG6_METFS
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor {ECO:0000313|EMBL:GAN33930.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
PAS domain S-box
Displaying 12 items

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