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RifSed_csp1_16ft_3_scaffold_20208

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_16ft_3_scaffold_20208_1
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(21..524)
DNA (504bp) protein (168aa)
Putative nucleic acid-binding protein, contains PIN domain Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BF12_9EURY
putative nucleic acid-binding protein, contains PIN domain
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp1_16ft_3_scaffold_20208_2
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(521..826)
DNA (306bp) protein (102aa)
Uncharacterized protein Tax=Natrinema altunense JCM 12890 RepID=M0A129_9EURY
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp1_16ft_3_scaffold_20208_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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919..1290
DNA (372bp) protein (124aa)
Putative peroxiredoxin Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KW83_METHD
Putative peroxiredoxin {ECO:0000313|EMBL:KCZ71735.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
putative peroxiredoxin
RifSed_csp1_16ft_3_scaffold_20208_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1334..2542
DNA (1209bp) protein (403aa)
3-hydroxy-3-methylglutaryl coenzyme A reductase {ECO:0000256|RuleBase:RU361219}; Short=HMG-CoA reductase {ECO:0000256|RuleBase:RU361219};; EC=1.1.1.34 {ECO:0000256|RuleBase:RU361219};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
3-hydroxy-3-methylglutaryl-coenzyme A reductase (EC:1.1.1.34)
3-hydroxy-3-methylglutaryl-CoA reductase Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12X00_METBU
RifSed_csp1_16ft_3_scaffold_20208_5
Myotis brandtii, Myotis, Chiroptera, Mammalia, Chordata, Metazoa

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2624..3415
DNA (792bp) protein (264aa)
Disintegrin and metalloproteinase domain-containing protein 30 Tax=Myotis brandtii RepID=S7Q482_MYOBR
Disintegrin and metalloproteinase domain-containing protein 30 {ECO:0000313|EMBL:EPQ15677.1}; species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Microchiroptera; Vespertilionidae; Myotis.;" source="Myotis brandtii (Brandt's bat).;"
cell surface protein
RifSed_csp1_16ft_3_scaffold_20208_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3425..4708)
DNA (1284bp) protein (428aa)
Ribulose bisphosphate carboxylase {ECO:0000256|HAMAP-Rule:MF_01133}; Short=RuBisCO {ECO:0000256|HAMAP-Rule:MF_01133};; EC=4.1.1.39 {ECO:0000256|HAMAP-Rule:MF_01133};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
rbcL; ribulose bisophosphate carboxylase (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
rbcL; ribulose bisophosphate carboxylase (EC:4.1.1.39)
RifSed_csp1_16ft_3_scaffold_20208_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4737..4919)
DNA (183bp) protein (61aa)
Putative HTH-type transcriptional regulatory protein Mpsy_1822 Tax=Methanolobus psychrophilus R15 RepID=K4MD04_9EURY
Putative HTH-type transcriptional regulatory protein ANME2D_03287 {ECO:0000256|HAMAP-Rule:MF_00584}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
Displaying 7 items

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