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RifSed_csp1_16ft_3_scaffold_28000

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_16ft_3_scaffold_28000_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3..575)
DNA (573bp) protein (191aa)
UPI0003D1C13E related cluster Tax=unknown RepID=UPI0003D1C13E
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LSU ribosomal protein L1e (L4p)
RifSed_csp1_16ft_3_scaffold_28000_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(671..1636)
DNA (966bp) protein (322aa)
UPI0003D1B8E0 related cluster Tax=unknown RepID=UPI0003D1B8E0
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|SAAS:SAAS00023038}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
rpl3p; 50S ribosomal protein L3P
RifSed_csp1_16ft_3_scaffold_28000_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1907..2263)
DNA (357bp) protein (119aa)
Dihydroneopterin aldolase {ECO:0000256|HAMAP-Rule:MF_02130}; Short=DHNA {ECO:0000256|HAMAP-Rule:MF_02130};; EC=4.1.2.25 {ECO:0000256|HAMAP-Rule:MF_02130};; 7,8-dihydroneopterin aldolase {ECO:0000256|HAMAP-Rule:MF_02130}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Dihydroneopterin aldolase Tax=Methanolobus psychrophilus R15 RepID=K4MF25_9EURY
hypothetical protein
RifSed_csp1_16ft_3_scaffold_28000_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2247..2930)
DNA (684bp) protein (228aa)
Archaetidylserine synthase {ECO:0000313|EMBL:KCZ73360.1}; EC=2.7.8.- {ECO:0000313|EMBL:KCZ73360.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
CDP-diacylglycerol-serine O-phosphatidyltransferase Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TUF1_METAC
pss; CDP-diacylglycerol--serine O-phosphatidyltransferase
RifSed_csp1_16ft_3_scaffold_28000_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2932..3564)
DNA (633bp) protein (211aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00664}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00664};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UPI0003D1C62A related cluster Tax=unknown RepID=UPI0003D1C62A
phosphatidylserine decarboxylase
RifSed_csp1_16ft_3_scaffold_28000_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3554..4369)
DNA (816bp) protein (272aa)
Cytochrome oxidase subunit I-like protein Tax=Methanosarcina mazei RepID=M1QIN7_METMZ
Archaeosortase A, PGF-CTERM-specific {ECO:0000313|EMBL:KCZ73362.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp1_16ft_3_scaffold_28000_7
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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4517..4759
DNA (243bp) protein (81aa)
Flavodoxin Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AU0_METBF
flavodoxin
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 7 items

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