ggKbase home page

RifSed_csp1_16ft_3_scaffold_28127

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_16ft_3_scaffold_28127_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2..403)
DNA (402bp) protein (134aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|RuleBase:RU003843}; Short=DHBP synthase {ECO:0000256|RuleBase:RU003843};; EC=4.1.99.12 {ECO:0000256|RuleBase:RU003843};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
3,4-dihydroxy-2-butanone 4-phosphate synthase Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EAM9_METEZ
3,4-dihydroxy-2-butanone 4-phosphate synthase
RifSed_csp1_16ft_3_scaffold_28127_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(400..1047)
DNA (648bp) protein (216aa)
Riboflavin kinase {ECO:0000256|HAMAP-Rule:MF_01285}; Short=RFK {ECO:0000256|HAMAP-Rule:MF_01285};; EC=2.7.1.161 {ECO:0000256|HAMAP-Rule:MF_01285};; CTP-dependent riboflavin kinase {ECO:0000256|HAMAP-Rule:MF_01285}; CTP:riboflavin 5'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01285}; Flavokinase {ECO:0000256|HAMAP-Rule:MF_01285}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Riboflavin kinase Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BGD0_9EURY
CTP-dependent riboflavin kinase
RifSed_csp1_16ft_3_scaffold_28127_3
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(1106..1912)
DNA (807bp) protein (269aa)
prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E6W6_METEZ
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_3_scaffold_28127_4

Not on your lists

2032..3837
DNA (1806bp) protein (602aa)
Predicted signal transduction histidine kinase Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W8Y7_UNCMA
Uncharacterized protein {ECO:0000313|EMBL:KKM85796.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
signal transduction histidine kinase
RifSed_csp1_16ft_3_scaffold_28127_5

Not on your lists

3837..4115
DNA (279bp) protein (93aa)
Response regulator receiver modulated GAF sensor protein Tax=Methanolinea tarda NOBI-1 RepID=G6FKA3_9EURY
Marine sediment metagenome DNA, contig: S01H1_S38055 {ECO:0000313|EMBL:GAG46103.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
response regulator receiver
Displaying 5 items

View Taxonomy