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SR-VP_26_10_2019_2_100cm_scaffold_9036

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_9036_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3..929
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1QM12_METMZ
Uncharacterized protein {ECO:0000313|EMBL:KCZ72495.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_9036_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(926..1642)
DNA (717bp) protein (239aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ73182.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_9036_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1695..2540)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XPZ6_METZD
Putative acyltransferase {ECO:0000313|EMBL:KCZ72419.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_9036_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2693..2827
DNA (135bp) protein (45aa)
Putative RNA-binding protein {ECO:0000313|EMBL:KCZ72418.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_9036_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2855..3868
DNA (1014bp) protein (338aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00559, ECO:0000256|RuleBase:RU003388}; Short=GAPDH {ECO:0000256|HAMAP-Rule:MF_00559};; EC=1.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00559, ECO:0000256|RuleBase:RU003388};; NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00559}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MTY0_9EURY
glyceraldehyde-3-phosphate dehydrogenase
SR-VP_26_10_2019_2_100cm_scaffold_9036_6
Vibrio parahaemolyticus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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3891..4517
DNA (627bp) protein (209aa)
DNA segregation ATPase, FtsK/SpoIIIE family n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YGJ6_THIV6
Uncharacterized protein {ECO:0000313|EMBL:ETZ12515.1}; TaxID=1449358 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio parahaemolyticus M0605.;"
DNA segregation ATPase FtsK
SR-VP_26_10_2019_2_100cm_scaffold_9036_7
Clostridium sp. CAG:798, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4536..6269)
DNA (1734bp) protein (578aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7F8M5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD15655.1}; TaxID=1262841 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:798.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_9036_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6274..7368)
DNA (1095bp) protein (365aa)
metallophosphoesterase id=1242709 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:EDT73288.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
serine/threonine protein phosphatase family protein
SR-VP_26_10_2019_2_100cm_scaffold_9036_9
unknown

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comp(7452..7688)
DNA (237bp) protein (79aa)
Flap endonuclease 1 n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KWU0_METHD
flap structure-specific endonuclease
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 9 items

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