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SR-VP_26_10_2019_2_100cm_scaffold_3228

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_3228_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3..119)
DNA (117bp) protein (39aa)
Chromosome partition protein Smc n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YW78_METPS
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
chromosome segregation protein SMC
SR-VP_26_10_2019_2_100cm_scaffold_3228_2
unknown

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comp(122..781)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KWM7_METHD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3228_3
unknown

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comp(876..2174)
DNA (1299bp) protein (433aa)
Aspartate--tRNA ligase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4M9P2_9EURY
aspartyl-tRNA synthetase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3228_4
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2288..2713
DNA (426bp) protein (142aa)
DNA mismatch endonuclease Vsr n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RKA3_METP4
DNA mismatch endonuclease Vsr
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_3228_5
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2703..4019
DNA (1317bp) protein (439aa)
Cytosine-specific methyltransferase n=2 Tax=Bacillus subtilis subsp. spizizenii RepID=E0TZ90_BACPZ
DNA (cytosine-5-)-methyltransferase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_3228_6
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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4020..6788
DNA (2769bp) protein (923aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
UPI0003D1B509 related cluster n=1 Tax=unknown RepID=UPI0003D1B509
sensor histidine kinase, putative
SR-VP_26_10_2019_2_100cm_scaffold_3228_7
RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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6817..7167
DNA (351bp) protein (117aa)
Putative uncharacterized protein id=4411672 bin=GWC2_Deltaproteobacteria_42_51 species=Nitrosomonas sp. AL212 genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
SR-VP_26_10_2019_2_100cm_scaffold_3228_8
unknown

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7403..8212
DNA (810bp) protein (270aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAN2_METMS
UBA/THIF-type NAD/FAD binding protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3228_9
unknown

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8217..8441
DNA (225bp) protein (75aa)
SirA family protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAM0_METMS
SirA family protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3228_10
unknown

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8438..8740
DNA (303bp) protein (101aa)
hypothetical protein id=14625371 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3228_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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8854..9198
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QTA9_PERMH
Uncharacterized protein involved in the oxidation of intracellular sulfur {ECO:0000313|EMBL:KCZ71814.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_3228_12
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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9201..9446
DNA (246bp) protein (82aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_3228_13

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9450..9890
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J9X2_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH38902.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
RDD domain-containing protein
SR-VP_26_10_2019_2_100cm_scaffold_3228_14
unknown

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comp(9975..11129)
DNA (1155bp) protein (385aa)
5-formaminoimidazole-4-carboxamide-1-(Beta)-D-ribofuranosyl 5'-monophosphate synthetase-like protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MLW3_9EURY
purP; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase-like protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3228_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11186..12079)
DNA (894bp) protein (298aa)
Uncharacterized membrane-associated protein n=1 Tax=uncultured archaeon GZfos1D1 RepID=Q64CQ4_9ARCH
Putative membrane-associated protein/domain {ECO:0000313|EMBL:KCZ73312.1}; Flags: Precursor;; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_3228_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12162..13406
DNA (1245bp) protein (415aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EA96_METMS
Uncharacterized protein {ECO:0000313|EMBL:KCZ73313.1}; Flags: Precursor;; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_3228_17
unknown

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13394..13705
DNA (312bp) protein (104aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3228_18
unknown

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13794..14060
DNA (267bp) protein (89aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3228_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14082..15200
DNA (1119bp) protein (373aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ73205.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_3228_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15166..16122)
DNA (957bp) protein (319aa)
MgtC/SapB transporter n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EAU8_METEZ
Putative membrane protein {ECO:0000313|EMBL:KCZ73203.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
MgtC/SapB transporter
Displaying 20 items

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