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SR-VP_26_10_2019_2_100cm_scaffold_3240

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_3240_1
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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comp(2..376)
DNA (375bp) protein (125aa)
glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum subterraneum.;"
Glutamine synthetase n=2 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6P7R5_9ARCH
SR-VP_26_10_2019_2_100cm_scaffold_3240_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(430..768)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II n=1 Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z7G0_DEHE1
Nitrogen regulatory protein PII {ECO:0000313|EMBL:KCZ72261.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
nitrogen regulatory protein P-II
SR-VP_26_10_2019_2_100cm_scaffold_3240_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(779..2080)
DNA (1302bp) protein (434aa)
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Ammonium transport protein (Amt family) id=4372459 bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
ammonium transporter
SR-VP_26_10_2019_2_100cm_scaffold_3240_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2232..3056
DNA (825bp) protein (275aa)
Nitrogenase iron protein {ECO:0000256|HAMAP-Rule:MF_00533}; EC=1.18.6.1 {ECO:0000256|HAMAP-Rule:MF_00533};; Nitrogenase Fe protein {ECO:0000256|HAMAP-Rule:MF_00533}; Nitrogenase component II {ECO:0000256|HAMAP-Rule:MF_00533}; Nitrogenase reductase {ECO:0000256|HAMAP-Rule:MF_00533}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
nifH; nitrogenase reductase (EC:1.18.6.1)
Dinitrogenase reductase NifH (Fragment) n=3 Tax=root RepID=D5I156_9ZZZZ
SR-VP_26_10_2019_2_100cm_scaffold_3240_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3061..3378
DNA (318bp) protein (106aa)
Nitrogen regulatory protein PII n=1 Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0IKU1_THETR
Nitrogen regulatory protein PII {ECO:0000313|EMBL:KCZ73695.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
nitrogen regulatory protein PII
SR-VP_26_10_2019_2_100cm_scaffold_3240_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3387..3743
DNA (357bp) protein (119aa)
Nitrogen regulatory protein PII n=1 Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0INB3_THETR
Nitrogen regulatory protein PII {ECO:0000313|EMBL:KCZ73694.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
nitrogen regulatory protein PII
SR-VP_26_10_2019_2_100cm_scaffold_3240_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3845..5215
DNA (1371bp) protein (457aa)
Nitrogenase protein alpha chain {ECO:0000256|RuleBase:RU004022}; EC=1.18.6.1 {ECO:0000256|RuleBase:RU004022};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Dinitrogenase alpha subunit n=1 Tax=uncultured microorganism RepID=D5I174_9ZZZZ
nitrogenase component I subunit alpha
SR-VP_26_10_2019_2_100cm_scaffold_3240_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5216..6532
DNA (1317bp) protein (439aa)
Nitrogenase molybdenum-iron protein {ECO:0000313|EMBL:KCZ73692.1}; EC=1.18.6.1 {ECO:0000313|EMBL:KCZ73692.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
nitrogenase (EC:1.18.6.1)
Nitrogenase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D760_METSW
SR-VP_26_10_2019_2_100cm_scaffold_3240_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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6542..6817
DNA (276bp) protein (92aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ73691.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Ferredoxin III, nif-specific id=3731135 bin=GWF2_Nitrospirae_44_13 species=Fischerella sp. JSC-11 genus=Fischerella taxon_order=Stigonematales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
ferredoxin III
SR-VP_26_10_2019_2_100cm_scaffold_3240_10
unknown

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6984..7373
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BCB2_9EURY
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3240_11
unknown

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7412..7873
DNA (462bp) protein (154aa)
Putative flavin-nucleotide-binding protein n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6TZB3_9EURY
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3240_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7870..8571
DNA (702bp) protein (234aa)
Glutamine amidotransferase class-I n=1 Tax=Thermincola potens (strain JR) RepID=D5XDD1_THEPJ
GMP synthase family protein {ECO:0000313|EMBL:KCZ73688.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
glutamine amidotransferase
SR-VP_26_10_2019_2_100cm_scaffold_3240_13
unknown

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8583..9317
DNA (735bp) protein (245aa)
putative permease id=12556485 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
protein of unknown function DUF81
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3240_14
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(9340..9570)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3II97_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:GAB61442.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_3240_15
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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comp(9637..10470)
DNA (834bp) protein (278aa)
Tail Collar domain protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AVE2_HERA2
tail collar domain-containing protein
Tail Collar domain protein {ECO:0000313|EMBL:ABX04633.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
SR-VP_26_10_2019_2_100cm_scaffold_3240_16
RBG_16_Bdellovibrionales_40_8_curated, Bdellovibrionales, Bdellovibrionia, Bdellovibrionota, Bacteria

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comp(10528..11841)
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BTI6_XYLCX
hypothetical protein
Tax=RBG_16_Bdellovibrionales_40_8_curated
SR-VP_26_10_2019_2_100cm_scaffold_3240_17
BJP_IG2158_OD1_28_51, Parcubacteria, Bacteria

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comp(12286..14478)
DNA (2193bp) protein (731aa)
hypothetical protein n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI0003495801
yapH; YapH protein
Tax=BJP_IG2158_OD1_28_51
SR-VP_26_10_2019_2_100cm_scaffold_3240_18
CG_CPR03_02, CG_CPR03, Bacteria

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comp(14492..16072)
DNA (1581bp) protein (527aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2CV11_9BACT
hypothetical protein
Tax=CG_CPR03_02
Displaying 18 items

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