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SR-VP_26_10_2019_2_100cm_scaffold_7047

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_7047_1
unknown

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602..1867
DNA (1266bp) protein (422aa)
glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
UPI0003D1BB3D related cluster n=1 Tax=unknown RepID=UPI0003D1BB3D
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_7047_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1864..2844
DNA (981bp) protein (327aa)
Probable porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
porphobilinogen deaminase (EC:2.5.1.61)
Probable porphobilinogen deaminase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=HEM3_METBU
SR-VP_26_10_2019_2_100cm_scaffold_7047_3
unknown

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2804..3541
DNA (738bp) protein (246aa)
Uroporphyrinogen-III methyltransferase (EC:2.1.1.107)
Uroporphyrin-III C-methyltransferase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KX65_METHD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_7047_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3703..4482
DNA (780bp) protein (260aa)
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:KCZ72558.1}; EC=4.2.1.75 {ECO:0000313|EMBL:KCZ72558.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Uroporphyrinogen-III synthase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MG99_9EURY
hemD; uroporphyrinogen-III synthase
SR-VP_26_10_2019_2_100cm_scaffold_7047_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4536..6296
DNA (1761bp) protein (587aa)
UPF0313 protein MCON_1402 n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BSW2_METCG
UPF0313 protein ANME2D_00989 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Radical SAM N-terminal domain-containing protein
SR-VP_26_10_2019_2_100cm_scaffold_7047_6
unknown

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6377..6682
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YCR8_DICT6
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_7047_7
unknown

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6657..7028
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BXP8_9GAMM
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_7047_8
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(7041..7268)
DNA (228bp) protein (76aa)
UPI0003D1AA69 related cluster n=1 Tax=unknown RepID=UPI0003D1AA69
exodeoxyribonuclease VII small subunit
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_7047_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(7253..8470)
DNA (1218bp) protein (406aa)
Exodeoxyribonuclease VII large subunit {ECO:0000313|EMBL:KCZ72758.1}; EC=3.1.11.6 {ECO:0000313|EMBL:KCZ72758.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
UPI0003D1A65D related cluster n=1 Tax=unknown RepID=UPI0003D1A65D
SR-VP_26_10_2019_2_100cm_scaffold_7047_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8536..8988)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BSX0_METCG
Uncharacterized protein {ECO:0000313|EMBL:KCZ72759.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_7047_11
unknown

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9081..9248
DNA (168bp) protein (56aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 11 items

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