ggKbase home page

SR-VP_26_10_2019_2_100cm_scaffold_22422

Search features with annotation key words

Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_22422_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1..729
DNA (729bp) protein (243aa)
RNA ligase, Pab1020 family {ECO:0000313|EMBL:KCZ70741.1}; EC=6.5.1.1 {ECO:0000313|EMBL:KCZ70741.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TH69_METAC
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_22422_2
GWC2_OP9X_49_35_curated, Atribacteria, Bacteria

Not on your lists

805..1398
DNA (594bp) protein (198aa)
hypothetical protein
Putative uncharacterized protein id=2530336 bin=GWC1_Spirochaetes_27_15 species=Guillardia theta genus=Guillardia taxon_order=Pyrenomonadales taxon_class=Cryptophyta phylum=unknown tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
Tax=GWC2_OP9X_49_35_curated
SR-VP_26_10_2019_2_100cm_scaffold_22422_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1466..2761)
DNA (1296bp) protein (432aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Tryptophan--tRNA ligase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KY59_METHD
tryptophanyl-tRNA synthetase
SR-VP_26_10_2019_2_100cm_scaffold_22422_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2849..4000)
DNA (1152bp) protein (384aa)
5'-deoxyadenosine deaminase {ECO:0000256|HAMAP-Rule:MF_01281}; Short=5'-dA deaminase {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.41 {ECO:0000256|HAMAP-Rule:MF_01281};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=2 Tax=Methanosarcina acetivorans RepID=MTAD_METAC
N-ethylammeline chlorohydrolase
Displaying 4 items

View Taxonomy