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SR-VP_26_10_2019_2_100cm_scaffold_232

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_232_1
unknown

Not on your lists

2..184
DNA (183bp) protein (61aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_232_2
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(101..544)
DNA (444bp) protein (148aa)
HD domain containing protein, metal dependent phosphohydrolase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12W52_METBU
metal-dependent phosphohydrolase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_232_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

648..1076
DNA (429bp) protein (143aa)
Acetyltransferase, N-acetylglutamate synthase {ECO:0000313|EMBL:KCZ72375.1}; EC=2.3.1.1 {ECO:0000313|EMBL:KCZ72375.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Acetyltransferase, N-acetylglutamate synthase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L275_METHD
GCN5-related N-acetyltransferase
SR-VP_26_10_2019_2_100cm_scaffold_232_4
unknown

Not on your lists

1229..1381
DNA (153bp) protein (51aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_232_5
unknown

Not on your lists


1484..2713
DNA (1230bp) protein (410aa)
UPI0003D1B529 related cluster n=1 Tax=unknown RepID=UPI0003D1B529
translation initiation factor IF-2 subunit gamma
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_232_6
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2710..3081
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XPS8_METZD
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_232_7
unknown

Not on your lists


3102..3737
DNA (636bp) protein (212aa)
DNA-directed RNA polymerase (EC:2.7.7.6)
DNA-directed RNA polymerase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XPS9_METZD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_232_8
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3737..3922
DNA (186bp) protein (62aa)
Transcription elongation factor Spt4 n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WQ76_METH6
DNA-directed RNA polymerase subunit E''
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_232_9
unknown

Not on your lists

3924..4457
DNA (534bp) protein (178aa)
UPF0218 protein Metho_0556 n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KUN7_METHD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_232_10
unknown

Not on your lists

4460..4933
DNA (474bp) protein (158aa)
30S ribosomal protein S24e n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I896_METCZ
rps24e; 30S ribosomal protein S24
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_232_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4939..5088
DNA (150bp) protein (50aa)
30S ribosomal protein S27ae n=4 Tax=Methanosarcina RepID=RS27A_METAC
30S ribosomal protein S27ae {ECO:0000256|HAMAP-Rule:MF_00777}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
30S ribosomal protein S27
SR-VP_26_10_2019_2_100cm_scaffold_232_12
unknown

Not on your lists

comp(5132..5479)
DNA (348bp) protein (116aa)
HIT family hydrolase n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B7745F
histidine triad (HIT) protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_232_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5476..5763)
DNA (288bp) protein (96aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ73344.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_232_14
unknown

Not on your lists

comp(5770..6957)
DNA (1188bp) protein (396aa)
Phosphopantothenoylcysteine decarboxylase (EC:4.1.1.36 6.3.2.5)
Phosphopantothenate-cysteine ligase / Phosphopantothenoylcysteine decarboxylase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q466Q5_METBF
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_232_15
Methanosarcina sp. Kolksee, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7124..8704
DNA (1581bp) protein (527aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q465C0_METBF
family finger-like protein
Family finger-like protein {ECO:0000313|EMBL:AKB46933.1}; TaxID=1434099 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. Kolksee.;"
SR-VP_26_10_2019_2_100cm_scaffold_232_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8738..9409
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WP27_METH6
Uncharacterized protein {ECO:0000313|EMBL:KCZ73240.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_232_17
unknown

Not on your lists

9410..10636
DNA (1227bp) protein (409aa)
NAD-dependent malic enzyme n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WL37_METH6
NAD-dependent malic enzyme
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_232_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10800..11705
DNA (906bp) protein (302aa)
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:KCZ72160.1}; EC=5.1.3.2 {ECO:0000313|EMBL:KCZ72160.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
galE-6; Nucleoside-diphosphate-sugar epimerase (EC:5.1.3.2)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I6A1_METCZ
SR-VP_26_10_2019_2_100cm_scaffold_232_19
unknown

Not on your lists

11728..12846
DNA (1119bp) protein (373aa)
Glutamine--scyllo-inositol transaminase n=1 Tax=Frankia sp. CN3 RepID=G6HBQ1_9ACTO
DegT/DnrJ/EryC1/StrS aminotransferase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_232_20
RIFCSPLOWO2_01_FULL_OP3X_45_10_curated, Omnitrophica, Bacteria

Not on your lists

12843..13796
DNA (954bp) protein (318aa)
UDP-glucose 4-epimerase id=3578832 bin=GWC2_Planctomycete_KSU_39_26 species=Patulibacter medicamentivorans genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
NAD-dependent epimerase/dehydratase
Tax=RIFCSPLOWO2_01_FULL_OP3X_45_10_curated
SR-VP_26_10_2019_2_100cm_scaffold_232_21
RIFOXYA2_FULL_WOR_1_36_21_curated, Saganbacteria, Bacteria

Not on your lists

13804..14523
DNA (720bp) protein (240aa)
Glycosyltransferase n=4 Tax=Leptospira borgpetersenii RepID=Q04TP4_LEPBJ
glycosyltransferase
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
SR-VP_26_10_2019_2_100cm_scaffold_232_22

Not on your lists

14489..15337
DNA (849bp) protein (283aa)
N-acetylneuraminate synthase (EC:2.5.1.56)
N-acetylneuraminate synthase n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PB91_DEFDS
Tax=RIFCSPLOWO2_12_FULL_Omnitrophica_50_11_curated
SR-VP_26_10_2019_2_100cm_scaffold_232_23
BJP_IG2102_Methanoregula_52_95, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15334..16476
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M9W1_9CLOT
hypothetical protein
Tax=BJP_IG2102_Methanoregula_52_95
SR-VP_26_10_2019_2_100cm_scaffold_232_24

Not on your lists

16476..17237
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Proteobacteria RepID=UPI00035C8456
acylneuraminate cytidylyltransferase
Tax=RIFCSPLOWO2_12_FULL_Omnitrophica_50_11_curated
SR-VP_26_10_2019_2_100cm_scaffold_232_25
Candidatus Omnitrophus sp. SKK-01, Candidatus Omnitrophus, Omnitrophica, Bacteria

Not on your lists

17230..18225
DNA (996bp) protein (332aa)
Dehydrogenase {ECO:0000313|EMBL:KJJ86083.1}; TaxID=1609969 species="Bacteria; Omnitrophica; Candidatus Omnitrophus.;" source="Candidatus Omnitrophus sp. SKK-01.;"
Putative dehydrogenase id=4054194 bin=GWC2_Deltaproteobacteria_56_8 species=Thiorhodovibrio sp. 970 genus=Thiorhodovibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
oxidoreductase domain protein
SR-VP_26_10_2019_2_100cm_scaffold_232_26
BJP_IG2102_Methanoregula_52_95, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18228..19550
DNA (1323bp) protein (441aa)
Spore coat polysaccharide biosynthesis protein SpsC n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MWM8_CLOSA
spsC; spore coat polysaccharide biosynthesis protein SpsC
Tax=BJP_IG2102_Methanoregula_52_95
SR-VP_26_10_2019_2_100cm_scaffold_232_27
RIFCSPLOWO2_01_FULL_OP3X_45_10_curated, Omnitrophica, Bacteria

Not on your lists

19581..20675
DNA (1095bp) protein (365aa)
Putative uncharacterized protein id=3578828 bin=GWC2_Planctomycete_KSU_39_26 species=Magnetospirillum gryphiswaldense genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
conserved protein of unknown function
Tax=RIFCSPLOWO2_01_FULL_OP3X_45_10_curated
SR-VP_26_10_2019_2_100cm_scaffold_232_28

Not on your lists

20672..22585
DNA (1914bp) protein (638aa)
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_59_12_curated
SR-VP_26_10_2019_2_100cm_scaffold_232_29
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

22633..24108
DNA (1476bp) protein (492aa)
Putative uncharacterized protein id=2171010 bin=GWB2_Nitrospirae_rel_47_37 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
cobalamin-binding radical SAM protein
Tax=GWB2_Nitrospirae_47_37_curated
SR-VP_26_10_2019_2_100cm_scaffold_232_30
Anabaena variabilis, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

24133..25917
DNA (1785bp) protein (595aa)
ABC transporter transmembrane protein (EC:3.6.3.27)
ABC transporter, transmembrane region {ECO:0000313|EMBL:ABA19951.1}; EC=3.6.3.27 {ECO:0000313|EMBL:ABA19951.1};; Flags: Precursor;; TaxID=240292 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena variabilis (strain ATCC 29413 / PCC 7937).;"
ABC transporter, transmembrane region n=1 Tax=Anabaena variabilis (strain ATCC 29413 / PCC 7937) RepID=Q3MGD5_ANAVT
Displaying items 1-30 of 69 in total

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