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SR-VP_26_10_2019_2_100cm_scaffold_2223

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_2223_1

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comp(3..176)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Nannochloropsis gaditana CCMP526 RepID=K8YXQ8_9STRA
Tax=RIFCSPLOWO2_01_FULL_Berkelbacteria_50_28_curated
SR-VP_26_10_2019_2_100cm_scaffold_2223_2
unknown

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comp(173..1135)
DNA (963bp) protein (321aa)
UPI0003D1AE8E related cluster n=1 Tax=unknown RepID=UPI0003D1AE8E
formylmethanofuran dehydrogenase, subunit F
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2223_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1140..3479)
DNA (2340bp) protein (780aa)
Polyferredoxin, heterodixulfide reductase subunit A {ECO:0000313|EMBL:KCZ72580.1}; EC=1.8.98.1 {ECO:0000313|EMBL:KCZ72580.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
CoB--CoM heterodisulfide reductase subunit A n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B9H2_METTP
methyl-viologen-reducing hydrogenase, delta subunit
SR-VP_26_10_2019_2_100cm_scaffold_2223_4
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3539..3895)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6U937_9EURY
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_2223_5
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4509..4772
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6TM92_9EURY
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_2223_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4756..7128)
DNA (2373bp) protein (791aa)
Peptidase family protein U32 n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TT99_METAC
Collagenase-like protease {ECO:0000313|EMBL:KCZ72978.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
peptidase family protein U32
SR-VP_26_10_2019_2_100cm_scaffold_2223_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7296..8057
DNA (762bp) protein (254aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8FG13_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KCZ73594.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
short-chain dehydrogenase/reductase SDR
SR-VP_26_10_2019_2_100cm_scaffold_2223_8
CG_Elusi_05, Elusimicrobia, Bacteria

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8121..8336
DNA (216bp) protein (72aa)
Tax=CG_Elusi_05
SR-VP_26_10_2019_2_100cm_scaffold_2223_9
Thermacetogenium phaeum, Thermacetogenium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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8452..8751
DNA (300bp) protein (100aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1089553 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermacetogenium.;" source="Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB).;"
Ribonuclease VapC n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LBZ9_THEPS
PilT-like protein
SR-VP_26_10_2019_2_100cm_scaffold_2223_10
unknown

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9403..9990
DNA (588bp) protein (196aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2223_11
unknown

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9983..10576
DNA (594bp) protein (198aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN60556.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SR-VP_26_10_2019_2_100cm_scaffold_2223_12
unknown

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10566..11489
DNA (924bp) protein (308aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2223_13
unknown

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comp(11552..12808)
DNA (1257bp) protein (419aa)
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=HEM1_METBU
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2223_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(12801..13448)
DNA (648bp) protein (216aa)
Siroheme synthase, N-terminal domain {ECO:0000313|EMBL:KCZ70748.1}; EC=1.3.1.76 {ECO:0000313|EMBL:KCZ70748.1};; EC=4.99.1.4 {ECO:0000313|EMBL:KCZ70748.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Siroheme synthase / Precorrin-2 oxidase/Sirohydrochlorin ferrochelatase n=2 Tax=Methanosarcina mazei RepID=M1QAB8_METMZ
Siroheme synthase / Precorrin-2 oxidase/Sirohydrochlorin ferrochelatase
SR-VP_26_10_2019_2_100cm_scaffold_2223_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(13445..13903)
DNA (459bp) protein (153aa)
Transcriptional regulator n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12WM3_METBU
Transcriptional regulator {ECO:0000313|EMBL:KCZ70749.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
AsnC family transcriptional regulator
SR-VP_26_10_2019_2_100cm_scaffold_2223_16
unknown

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14014..14367
DNA (354bp) protein (118aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2223_17
unknown

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comp(14399..14557)
DNA (159bp) protein (53aa)
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2223_18
unknown

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14661..15347
DNA (687bp) protein (229aa)
UPF0758 protein Mbar_A2303 n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Y2303_METBF
DNA repair protein RadC
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2223_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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15361..15981
DNA (621bp) protein (207aa)
Probable molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HAMAP-Rule:MF_00316};; GTP:molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Mo-MPT guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin-guanine dinucleotide synthase {ECO:0000256|HAMAP-Rule:MF_00316}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Probable molybdenum cofactor guanylyltransferase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E6Y1_METEZ
molybdopterin-guanine dinucleotide biosynthesis protein
SR-VP_26_10_2019_2_100cm_scaffold_2223_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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15959..16726
DNA (768bp) protein (256aa)
Formate dehydrogenase family accessory protein FdhD n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XP59_METZD
Formate dehydrogenase family accessory protein FdhD {ECO:0000313|EMBL:KCZ72185.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
formate dehydrogenase family accessory protein FdhD
SR-VP_26_10_2019_2_100cm_scaffold_2223_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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16723..17196
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Desulfovibrio oxyclinae RepID=UPI000367A6A8
Molybdopterin guanine dinucleotide biosynthesis accessory protein MobB {ECO:0000313|EMBL:KCZ72184.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
molybdopterin-guanine dinucleotide biosynthesis protein MobB
SR-VP_26_10_2019_2_100cm_scaffold_2223_22
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(17193..17852)
DNA (660bp) protein (220aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KPP7_ARCVS
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEA47575.1}; TaxID=693661 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus veneficus (strain DSM 11195 / SNP6).;"
SR-VP_26_10_2019_2_100cm_scaffold_2223_23
Methanosarcina sp. 2.H.T.1A.15, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(17923..19233)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1WXX8_BACMS
Uncharacterized protein {ECO:0000313|EMBL:KKG19084.1}; TaxID=1483596 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.T.1A.15.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2223_24
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(19286..19774)
DNA (489bp) protein (163aa)
AsnC family transcriptional regulator n=2 Tax=root RepID=M1PVR7_9ZZZZ
Transcriptional regulator {ECO:0000313|EMBL:KCZ70610.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
putative AsnC family transcriptional regulator
SR-VP_26_10_2019_2_100cm_scaffold_2223_25
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(19738..20814)
DNA (1077bp) protein (359aa)
Radical SAM family protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12WM1_METBU
Putative heme d1 biosynthesis radical SAM protein NirJ2 {ECO:0000313|EMBL:KCZ70609.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
radical SAM family Fe-S protein
Displaying 25 items

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