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SR-VP_26_10_2019_2_100cm_scaffold_2394

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_2394_1
unknown

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1..519
DNA (519bp) protein (173aa)
Ss-DNA-specific exonuclease n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TSH3_METAC
recJ; ss-DNA-specific exonuclease
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2394_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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618..2549
DNA (1932bp) protein (644aa)
UPI0003D19FDA related cluster n=1 Tax=unknown RepID=UPI0003D19FDA
PGF-CTERM archaeal protein-sorting signal {ECO:0000313|EMBL:KCZ71811.1}; Flags: Precursor;; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2394_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2934..4253)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q465C0_METBF
Conserved repeat protein {ECO:0000313|EMBL:KCZ71810.1}; Flags: Precursor;; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2394_4
unknown

Not on your lists

4372..4686
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KZB3_METHD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2394_5
unknown

Not on your lists

comp(4687..5886)
DNA (1200bp) protein (400aa)
mat; S-adenosylmethionine synthetase (EC:2.5.1.6)
Methionine adenosyltransferase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TS43_METAC
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2394_6
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5982..6539)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PV13_METMA
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_2394_7
unknown

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6787..7029
DNA (243bp) protein (81aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2394_8
unknown

Not on your lists

7030..7521
DNA (492bp) protein (164aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2394_9
unknown

Not on your lists

7608..7991
DNA (384bp) protein (128aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN64290.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SR-VP_26_10_2019_2_100cm_scaffold_2394_10
unknown

Not on your lists


8333..10891
DNA (2559bp) protein (853aa)
Valine--tRNA ligase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XKB5_METZD
valyl-tRNA synthetase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2394_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10893..11249)
DNA (357bp) protein (119aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72413.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_2394_12
unknown

Not on your lists

11354..12205
DNA (852bp) protein (284aa)
Putative ribose 1,5-bisphosphate isomerase n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2QAU0_METFO
thiazole biosynthesis protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2394_13
unknown

Not on your lists

12309..12542
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EWX8_9BACT
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2394_14
RBG_13_Chloroflexi_46_14_curated, Chloroflexi, Bacteria

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12539..13012
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XNK4_METZD
hypothetical protein
Tax=RBG_13_Chloroflexi_46_14_curated
SR-VP_26_10_2019_2_100cm_scaffold_2394_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13023..13361)
DNA (339bp) protein (113aa)
Glutaredoxin/thioredoxin-like protein n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LLN8_THEBM
Glutaredoxin-like protein {ECO:0000313|EMBL:KCZ71909.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
glutaredoxin
SR-VP_26_10_2019_2_100cm_scaffold_2394_16
unknown

Not on your lists

comp(13363..13779)
DNA (417bp) protein (139aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2394_17
unknown

Not on your lists

comp(13781..14809)
DNA (1029bp) protein (343aa)
Small-conductance mechanosensitive channel n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HHZ2_METFS
small-conductance mechanosensitive channel
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2394_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14925..15797
DNA (873bp) protein (291aa)
FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46B63_METBF
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_2394_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15798..16163
DNA (366bp) protein (122aa)
RecG-like helicase {ECO:0000313|EMBL:KCZ72462.1}; EC=3.6.1.- {ECO:0000313|EMBL:KCZ72462.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_2394_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16204..17157
DNA (954bp) protein (318aa)
Daunorubicin resistance ABC transporter ATPase subunit n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I5D5_METB6
Daunorubicin resistance ABC transporter ATP-binding subunit {ECO:0000313|EMBL:KCZ72482.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
daunorubicin resistance ABC transporter ATPase subunit
SR-VP_26_10_2019_2_100cm_scaffold_2394_21
unknown

Not on your lists

17154..17918
DNA (765bp) protein (255aa)
Putative ABC transporter permease protein n=1 Tax=uncultured crenarchaeote RepID=Q702C6_9CREN
ABC efflux transporter, permease protein, Drug Exporter-1 (DrugE1) Family
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2394_22
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18879..19559
DNA (681bp) protein (227aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71504.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_2394_23
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19643..19888)
DNA (246bp) protein (82aa)
UPI0003D1B5A8 related cluster n=1 Tax=unknown RepID=UPI0003D1B5A8
Transcriptional regulator with HTH domain and aminotransferase domain {ECO:0000313|EMBL:ETA66758.1}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus tindarius DSM 2278.;"
transcriptional regulator with HTH domain and aminotransferase domain
Displaying 23 items

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