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SR-VP_26_10_2019_2_100cm_scaffold_2791

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_2791_1
unknown

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1..132
DNA (132bp) protein (44aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2791_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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232..1257
DNA (1026bp) protein (342aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21)
UPF0284 protein Mbar_A0178 n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Y178_METBF
UPF0284 protein ANME2D_00526 {ECO:0000256|HAMAP-Rule:MF_01086}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_2791_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1258..1629)
DNA (372bp) protein (124aa)
Transcriptional regulator n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12UA5_METBU
Putative transcriptional regulator {ECO:0000313|EMBL:KCZ73457.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
transcriptional regulator TrmB
SR-VP_26_10_2019_2_100cm_scaffold_2791_4
BJP_IG2102_Methanoregula_52_95, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1948..2454
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Methanolinea tarda NOBI-1 RepID=G6FJB3_9EURY
protein of unknown function (DUF350)
Tax=BJP_IG2102_Methanoregula_52_95
SR-VP_26_10_2019_2_100cm_scaffold_2791_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2558..3034
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EAT9_METEZ
Uncharacterized protein {ECO:0000313|EMBL:KCZ72773.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2791_6
unknown

Not on your lists

3090..3602
DNA (513bp) protein (171aa)
Putative uncharacterized protein n=1 Tax=Thermincola potens (strain JR) RepID=D5XAY8_THEPJ
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2791_7
unknown

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3704..3910
DNA (207bp) protein (69aa)
Putative uncharacterized protein n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RFL1_MOOTA
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2791_8
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3914..4837)
DNA (924bp) protein (308aa)
carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L6B7_KORCO
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_2791_9
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4901..5269)
DNA (369bp) protein (123aa)
Blue (Type 1) copper domain protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E936_METEZ
blue (type 1) copper domain-containing protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_2791_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5345..6661)
DNA (1317bp) protein (439aa)
Cobalt ABC transporter, ATP-binding protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AL4_METBF
Cobalt transport protein ATP-binding subunit {ECO:0000313|EMBL:KCZ73111.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ATPase component CbiO of energizing module of cobalt ECF transporter
SR-VP_26_10_2019_2_100cm_scaffold_2791_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6669..7490)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Clostridium tyrobutyricum RepID=UPI00031E99F5
Cobalt ABC transporter, permease protein CbiQ {ECO:0000313|EMBL:KCZ73112.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
cobalt ABC transporter, permease protein CbiQ
SR-VP_26_10_2019_2_100cm_scaffold_2791_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7490..8404)
DNA (915bp) protein (305aa)
cobalt transporter CbiM n=1 Tax=Clostridium tyrobutyricum RepID=UPI0002DED10B
ABC-type Co2+ transport system, permease component {ECO:0000313|EMBL:KCZ73113.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ABC-type Co2+ transport system, permease component
SR-VP_26_10_2019_2_100cm_scaffold_2791_13
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

8597..9790
DNA (1194bp) protein (398aa)
Putative uncharacterized protein n=1 Tax=Thermincola potens (strain JR) RepID=D5XE68_THEPJ
hypothetical protein
Tax=BJP_IG2158_Zixibacteria_48_33
SR-VP_26_10_2019_2_100cm_scaffold_2791_14
unknown

Not on your lists

10435..10911
DNA (477bp) protein (159aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2791_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11047..11289)
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAM4_METMS
Uncharacterized protein {ECO:0000313|EMBL:KCZ72711.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2791_16
unknown

Not on your lists

comp(11344..11814)
DNA (471bp) protein (157aa)
aspartate carbamoyltransferase regulatory subunit (EC:2.1.3.2)
Aspartate carbamoyltransferase regulatory chain n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=PYRI_METTP
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2791_17
unknown

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comp(11811..12725)
DNA (915bp) protein (305aa)
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BZH6_METCG
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2791_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12802..13605)
DNA (804bp) protein (268aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XNV8_METZD
SR-VP_26_10_2019_2_100cm_scaffold_2791_19
unknown

Not on your lists

comp(13609..14241)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I510_METCZ
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2791_20
unknown

Not on your lists

14365..15216
DNA (852bp) protein (284aa)
Demethylmenaquinone methyltransferase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q3Q9_9BACT
ubiquinone/menaquinone biosynthesis methyltransferase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2791_21
unknown

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15384..15977
DNA (594bp) protein (198aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2791_22
unknown

Not on your lists

16011..16406
DNA (396bp) protein (132aa)
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2791_23
unknown

Not on your lists

16416..17210
DNA (795bp) protein (265aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2791_24
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(17170..17880)
DNA (711bp) protein (237aa)
hypothetical protein id=5082497 bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix ochracea genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=CG_Rhodof_04
Displaying 24 items

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