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SR-VP_26_10_2019_C_40cm_scaffold_53

Search features with annotation key words

Displaying items 151-180 of 253 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_C_40cm_scaffold_53_151
unknown

Not on your lists

comp(132999..133562)
-----------------
DNA (564bp)
protein (188aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_53_152
unknown

Not on your lists

133659..134177
-----------------
DNA (519bp)
protein (173aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W750_UNCMA
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_53_153
unknown

Not on your lists

134174..134743
-----------------
DNA (570bp)
protein (190aa)
hypothetical protein id=24647302 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_53_154
unknown

Not on your lists

134731..136395
-----------------
DNA (1665bp)
protein (555aa)
Uncharacterized protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RX77_FERPA
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_53_155
unknown

Not on your lists

136403..138190
-----------------
DNA (1788bp)
protein (596aa)
Repeat-containing protein n=1 Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7AKE2_GEOSK
fibronectin I domain-containing protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_53_156
unknown

Not on your lists

138198..138917
-----------------
DNA (720bp)
protein (240aa)
UPI0003D1AECF related cluster n=1 Tax=unknown RepID=UPI0003D1AECF
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_53_157
unknown

Not on your lists

138919..140280
-----------------
DNA (1362bp)
protein (454aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XNV1_METZD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_53_158
unknown

Not on your lists

comp(140418..141026)
-----------------
DNA (609bp)
protein (203aa)
ZPR1-like zinc finger protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12ZC7_METBU
Zn finger containing protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_53_159
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(141023..141391)
-----------------
DNA (369bp)
protein (123aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12ZC8_METBU
Uncharacterized protein {ECO:0000313|EMBL:KCZ70576.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_53_160
unknown

Not on your lists


comp(141433..141915)
-----------------
DNA (483bp)
protein (161aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W8R8_UNCMA
putative RNA-binding protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_53_161
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

142004..142219
-----------------
DNA (216bp)
protein (72aa)
Putative snRNP Sm-like protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KY05_METHD
Putative snRNP Sm-like protein {ECO:0000256|HAMAP-Rule:MF_00257}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
small nuclear ribonucleoprotein
SR-VP_26_10_2019_C_40cm_scaffold_53_162
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

142418..143902
-----------------
DNA (1485bp)
protein (495aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UPI0003D1ADD7 related cluster n=1 Tax=unknown RepID=UPI0003D1ADD7
amidophosphoribosyltransferase
SR-VP_26_10_2019_C_40cm_scaffold_53_163
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

143955..144587
-----------------
DNA (633bp)
protein (211aa)
Small GTP-binding protein domain protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KWZ3_METHD
Small GTP-binding protein domain {ECO:0000313|EMBL:KCZ70572.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
small GTP-binding protein domain protein
SR-VP_26_10_2019_C_40cm_scaffold_53_164
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

144594..144950
-----------------
DNA (357bp)
protein (119aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KWN5_METHD
Uncharacterized protein {ECO:0000313|EMBL:KCZ70571.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_53_165
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

144950..145360
-----------------
DNA (411bp)
protein (137aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12ZG7_METBU
Zn-ribbon containing protein {ECO:0000313|EMBL:KCZ70570.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_53_166
unknown

Not on your lists

comp(145351..145785)
-----------------
DNA (435bp)
protein (145aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q465N3_METBF
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_53_167
unknown

Not on your lists

comp(145844..146461)
-----------------
DNA (618bp)
protein (206aa)
Methyltransferase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12UX9_METBU
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_53_168
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

146493..147833
-----------------
DNA (1341bp)
protein (447aa)
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:KCZ70566.1}; EC=2.7.1.49 {ECO:0000313|EMBL:KCZ70566.1};; EC=2.7.4.7 {ECO:0000313|EMBL:KCZ70566.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Phosphomethylpyrimidine kinase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E691_METEZ
phosphomethylpyrimidine kinase
SR-VP_26_10_2019_C_40cm_scaffold_53_169
unknown

Not on your lists

148108..149202
-----------------
DNA (1095bp)
protein (365aa)
Chorismate synthase n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1Q4A3_METMZ
Chorismate synthase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_53_170
unknown

Not on your lists

149224..150837
-----------------
DNA (1614bp)
protein (538aa)
O-phosphoserine--tRNA(Cys) ligase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KTS1_METHD
O-phosphoseryl-tRNA(Cys) synthetase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_53_171
unknown

Not on your lists

150834..151685
-----------------
DNA (852bp)
protein (284aa)
shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=AROK_METBU
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_53_172
unknown

Not on your lists

151676..151960
-----------------
DNA (285bp)
protein (95aa)
chorismate mutase (EC:5.4.99.5)
Chorismate mutase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12XK1_METBU
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_53_173
unknown

Not on your lists

152183..152335
-----------------
DNA (153bp)
protein (51aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_53_174
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(152313..152693)
-----------------
DNA (381bp)
protein (127aa)
Death-on-curing family protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BX54_METCG
death-on-curing family protein
Death-on-curing family protein {ECO:0000313|EMBL:AEB68610.1}; TaxID=990316 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC; 103675 / OCM 69 / GP-6) (Methanothrix concilii).;"
SR-VP_26_10_2019_C_40cm_scaffold_53_175
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(152868..153353)
-----------------
DNA (486bp)
protein (162aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI0003749E3C
Tryptophan-rich sensory protein {ECO:0000313|EMBL:KCZ71937.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_53_176
unknown

Not on your lists

comp(153366..154709)
-----------------
DNA (1344bp)
protein (448aa)
Coenzyme F390 synthetase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46F52_METBF
coenzyme F390 synthetase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_53_177

Not on your lists

155162..156994
-----------------
DNA (1833bp)
protein (611aa)
Hypothetical membrane protein, containing TPR repeats n=1 Tax=uncultured archaeon RepID=D1JD18_9ARCH
Hypothetical membrane protein, containing TPR repeats {ECO:0000313|EMBL:CBH39998.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_53_178
Methanosarcina sp. Kolksee, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(157184..157537)
-----------------
DNA (354bp)
protein (118aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KN04_ARCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB48842.1}; TaxID=1434099 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. Kolksee.;"
SR-VP_26_10_2019_C_40cm_scaffold_53_179
unknown

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comp(157534..157830)
-----------------
DNA (297bp)
protein (99aa)
DNA polymerase beta domain protein region n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KN03_ARCVS
DNA polymerase beta domain-containing protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_53_180
unknown

Not on your lists

comp(157827..157982)
-----------------
DNA (156bp)
protein (52aa)

This feature has no annotations

Displaying items 151-180 of 253 in total

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