ggKbase home page

SR-VP_26_10_2019_C_40cm_scaffold_53_158

Organism: SR-VP_26_10_2019_C_40cm_Methanoperedens_44_15

near complete RP 30 / 55 MC: 3 BSCG 27 / 51 ASCG 37 / 38 MC: 1
Location: comp(140418..141026)

Top 3 Functional Annotations

Value Algorithm Source
ZPR1-like zinc finger protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12ZC7_METBU similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 198.0
  • Bit_score: 226
  • Evalue 1.30e-56
Zn finger containing protein similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 211.0
  • Bit_score: 231
  • Evalue 1.10e-58
Tax=RBG_16_Euryarchaeota_41_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 193.0
  • Bit_score: 296
  • Evalue 1.90e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sequences

DNA sequence
Length: 609
GTGAACTCTGAATTTATACGCCCTTTAACGGTTACAAGAAGCACCTGCCCGCTGTGCCATAAAGAACTTATAACGAACTGGGTTTCGCAGAACATTCCGTTTTTCGGGGAAGTGATGCATATTACTTCCAATTGCGAATGCGGGTTCAGGTACACGGATACATTGATAATGGCCCAGCGTGAGCCCGTGCATTTTGAATTGAAGGTCAGGGACCTGGATGATCTGAATGCCAGGGTCGTGCGATCCACATCGGGAACTATCAGGATACCCGAACTCGGGATTGACATCGAGCCGGGGCCTGCCTCTGAATCCTTCGTATCCAATATCGAAGGGGTGCTTGAAAGGGTAGAAGAGATTCTGGAGATGGTGGAGAGGTGGGGAGAAGCAGGAAAGACCGAGCGCGCCCATGAGCTAATGTCGATAATCGAGAGAATAAAAGCAGGGGAGCATGAAGTCACAGTTATAATAGAGGACCCGCTGGGCAACAGCGCCATAATTGCAGAGAAGGCCATCAGCAGGGAGCTTACTGGGGAAGAAGCTGCCAATCTGAGAACAGGTATGATTGTATTTGAAAAAGAAGAAATTGATTCCAATGAGAATCTGCAATAG
PROTEIN sequence
Length: 203
VNSEFIRPLTVTRSTCPLCHKELITNWVSQNIPFFGEVMHITSNCECGFRYTDTLIMAQREPVHFELKVRDLDDLNARVVRSTSGTIRIPELGIDIEPGPASESFVSNIEGVLERVEEILEMVERWGEAGKTERAHELMSIIERIKAGEHEVTVIIEDPLGNSAIIAEKAISRELTGEEAANLRTGMIVFEKEEIDSNENLQ*