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SR-VP_26_10_2019_C_40cm_scaffold_384

Search features with annotation key words

Displaying items 1-30 of 154 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_C_40cm_scaffold_384_1
unknown

Not on your lists

225..713
DNA (489bp) protein (163aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_384_2
unknown

Not on your lists

1181..1738
DNA (558bp) protein (186aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_384_3
unknown

Not on your lists

comp(2202..2708)
DNA (507bp) protein (169aa)
aspartate carbamoyltransferase regulatory subunit (EC:2.1.3.2)
Aspartate carbamoyltransferase regulatory chain n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=PYRI_METTP
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_384_4
unknown

Not on your lists

comp(2705..3616)
DNA (912bp) protein (304aa)
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BZH6_METCG
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_384_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3622..4449)
DNA (828bp) protein (276aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XNV8_METZD
SR-VP_26_10_2019_C_40cm_scaffold_384_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4451..5089)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W3A0_UNCMA
Uncharacterized protein {ECO:0000313|EMBL:KCZ72572.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_384_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5166..8675)
DNA (3510bp) protein (1170aa)
Chromosome partition protein Smc n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KUL2_METHD
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
chromosome segregation protein SMC
SR-VP_26_10_2019_C_40cm_scaffold_384_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8679..9347)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KWM7_METHD
Uncharacterized protein {ECO:0000313|EMBL:KCZ73022.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_384_9
unknown

Not on your lists


comp(9442..10740)
DNA (1299bp) protein (433aa)
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EB21_METMS
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_384_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10878..11630)
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E8U5_METMS
Uncharacterized protein {ECO:0000313|EMBL:KCZ73582.1}; Flags: Precursor;; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_384_11
Methanosarcina vacuolata, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11719..12999)
DNA (1281bp) protein (427aa)
PBS lyase HEAT domain protein repeat-containing protein n=1 Tax=Microcystis aeruginosa PCC 9443 RepID=I4G099_MICAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB44890.1}; TaxID=1434123 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina vacuolata Z-761.;"
SR-VP_26_10_2019_C_40cm_scaffold_384_12
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13323..13868
DNA (546bp) protein (182aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_384_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13865..14551)
DNA (687bp) protein (229aa)
CoA-substrate-specific enzyme activase n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S717_METSF
Putative CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:KCZ70675.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
CoA-substrate-specific enzyme activase
SR-VP_26_10_2019_C_40cm_scaffold_384_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14548..15495)
DNA (948bp) protein (316aa)
2-hydroxyglutaryl-CoA dehydratase D-component n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S716_METSF
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB {ECO:0000313|EMBL:KCZ72629.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
2-hydroxyglutaryl-CoA dehydratase D-component
SR-VP_26_10_2019_C_40cm_scaffold_384_15
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15671..15994
DNA (324bp) protein (108aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_384_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15991..16941)
DNA (951bp) protein (317aa)
GTP cyclohydrolase MptA {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.39 {ECO:0000256|HAMAP-Rule:MF_01527};; GTP cyclohydrolase IV {ECO:0000256|HAMAP-Rule:MF_01527}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
GTP cyclohydrolase MptA n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E9X3_METEZ
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_384_17
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

17160..17714
DNA (555bp) protein (185aa)
Putative signal-transduction protein with CBS domains n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B5X6_METTP
signal-transduction protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_384_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

17751..18539
DNA (789bp) protein (263aa)
CBS domain protein n=2 Tax=Methanosarcina mazei RepID=M1QID1_METMZ
Putative signal-transduction protein {ECO:0000313|EMBL:KCZ70745.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
CBS domain protein
SR-VP_26_10_2019_C_40cm_scaffold_384_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18549..19481
DNA (933bp) protein (311aa)
Putative signal transduction protein with CBS domains n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMH8_METZD
Putative transcriptional regulator {ECO:0000313|EMBL:KCZ70744.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
putative signal transduction protein with CBS domains
SR-VP_26_10_2019_C_40cm_scaffold_384_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

19492..20340
DNA (849bp) protein (283aa)
CBS domain protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BWT7_METCG
Putative transcriptional regulator {ECO:0000313|EMBL:KCZ70743.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
CBS domain-containing protein
SR-VP_26_10_2019_C_40cm_scaffold_384_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

20350..21135
DNA (786bp) protein (262aa)
CBS domain containing membrane protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E5T0_METEZ
CBS-domain-containing membrane protein {ECO:0000313|EMBL:KCZ70742.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_384_22
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

21132..22301
DNA (1170bp) protein (390aa)
RNA ligase, Pab1020 family {ECO:0000313|EMBL:KCZ70741.1}; EC=6.5.1.1 {ECO:0000313|EMBL:KCZ70741.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TH69_METAC
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_384_23
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

22452..23597
DNA (1146bp) protein (382aa)
Selenocysteine lyase {ECO:0000313|EMBL:KCZ70739.1}; EC=2.8.1.7 {ECO:0000313|EMBL:KCZ70739.1};; EC=4.4.1.16 {ECO:0000313|EMBL:KCZ70739.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Uncharacterized protein n=1 Tax=candidate division WWE3 bacterium RAAC2_WWE3_1 RepID=V5RTZ0_9BACT
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_384_24
unknown

Not on your lists

23649..23921
DNA (273bp) protein (91aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_384_25
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

23931..24779
DNA (849bp) protein (283aa)
Putative kinase, sugar kinase superfamily {ECO:0000313|EMBL:KCZ70738.1}; EC=2.7.1.33 {ECO:0000313|EMBL:KCZ70738.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z226_METPS
kinase (sugar kinase superfamily)
SR-VP_26_10_2019_C_40cm_scaffold_384_26
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

24776..25531
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z0W7_METPS
Uncharacterized protein {ECO:0000313|EMBL:KCZ70737.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_384_27
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(25488..26627)
DNA (1140bp) protein (380aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70731.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_C_40cm_scaffold_384_28
unknown

Not on your lists

comp(26717..28375)
DNA (1659bp) protein (553aa)
UPI0003D1A02C related cluster n=1 Tax=unknown RepID=UPI0003D1A02C
thermosome, chaperonin Cpn60/TCP-1
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_384_trna_1
unknown

Not on your lists

28731..28802
DNA (72bp)
transferRNA Cys
SR-VP_26_10_2019_C_40cm_scaffold_384_29

Not on your lists

comp(28828..29523)
DNA (696bp) protein (232aa)
Putative transcriptional regulator n=1 Tax=uncultured archaeon A07HN63 RepID=V4YBW4_9ARCH
Putative transcriptional regulator {ECO:0000313|EMBL:ESS08597.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
transcriptional regulator
Displaying items 1-30 of 154 in total

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