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SR-VP_0-2_scaffold_141_5219186

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_0-2_scaffold_141_5219186_1
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(3..1571)
DNA (1569bp) protein (523aa)
Uncharacterized protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WP90_METH6
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_5219186_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(1568..2131)
DNA (564bp) protein (188aa)
LemA family protein n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7IB50_METB6
LemA family protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_5219186_3
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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2390..2680
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TIY7_METAC
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_5219186_4
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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2690..3706
DNA (1017bp) protein (339aa)
Flap structure-specific endonuclease (EC:3.-.-.-)
UPI0003D1B400 related cluster n=1 Tax=unknown RepID=UPI0003D1B400
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_5219186_5
unknown

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3859..3963
DNA (105bp) protein (35aa)

This feature has no annotations

SR-VP_0-2_scaffold_141_5219186_6
Lysinibacillus sphaericus, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4045..4482)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Lysinibacillus sphaericus OT4b.31 RepID=R7ZD98_LYSSH
Uncharacterized protein {ECO:0000313|EMBL:EON72095.1}; TaxID=1285586 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus sphaericus OT4b.31.;"
lactoylglutathione lyase-like lyase
SR-VP_0-2_scaffold_141_5219186_7
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(4616..5203)
DNA (588bp) protein (196aa)
Uncharacterized protein n=3 Tax=Bacillus cereus RepID=R8PE87_BACCE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SR-VP_0-2_scaffold_141_5219186_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5317..6339)
DNA (1023bp) protein (341aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00559, ECO:0000256|RuleBase:RU003388}; Short=GAPDH {ECO:0000256|HAMAP-Rule:MF_00559};; EC=1.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00559, ECO:0000256|RuleBase:RU003388};; NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00559}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MTY0_9EURY
glyceraldehyde-3-phosphate dehydrogenase
SR-VP_0-2_scaffold_141_5219186_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6366..6539)
DNA (174bp) protein (58aa)
Putative RNA-binding protein {ECO:0000313|EMBL:KCZ72418.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_0-2_scaffold_141_5219186_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6654..7499
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XPZ6_METZD
Putative acyltransferase {ECO:0000313|EMBL:KCZ72419.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_0-2_scaffold_141_5219186_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7552..8268
DNA (717bp) protein (239aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ73182.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_0-2_scaffold_141_5219186_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8323..10026)
DNA (1704bp) protein (568aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TMT4_METAC
Uncharacterized protein {ECO:0000313|EMBL:KCZ72495.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_0-2_scaffold_141_5219186_13
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

10261..11010
DNA (750bp) protein (250aa)
TIGR00162 family protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T9G2_9EURY
TIGR00162 family protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_5219186_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11018..11632)
DNA (615bp) protein (205aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Endonuclease III n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1PWS9_METMZ
Endonuclease III
SR-VP_0-2_scaffold_141_5219186_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11754..12191)
DNA (438bp) protein (146aa)
DNA polymerase beta domain protein region n=1 Tax=Methanofollis liminatans DSM 4140 RepID=J1L174_9EURY
Putative nucleotidyltransferase {ECO:0000313|EMBL:KCZ71006.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_0-2_scaffold_141_5219186_16
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12263..15115
DNA (2853bp) protein (951aa)
Phosphorylase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q469V2_METBF
Phosphorylase {ECO:0000313|EMBL:AKB57558.1}; TaxID=1434106 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 227.;"
hypothetical protein
SR-VP_0-2_scaffold_141_5219186_17
Thermoanaerobacter siderophilus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

15192..16151
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Thermoanaerobacter siderophilus SR4 RepID=I9KSX4_9THEO
Uncharacterized protein {ECO:0000313|EMBL:EIV99905.1}; TaxID=880478 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter siderophilus SR4.;"
hypothetical protein
SR-VP_0-2_scaffold_141_5219186_18
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

16239..17162
DNA (924bp) protein (308aa)
Phosphoesterase, RecJ domain protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B987_METTP
phosphoesterase domain-containing protein
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 18 items

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