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SR-VP_26_10_2020_1_100CM_scaffold_4192145

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2020_1_100CM_scaffold_4192145_1
unknown

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comp(203..493)
DNA (291bp) protein (97aa)
DNA polymerase beta domain-containing protein
DNA polymerase beta domain protein region n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E0C7_DICTD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_4192145_2
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(673..1419)
DNA (747bp) protein (249aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CCI2_9GAMM
Tax=GWF2_Bacteroidetes_33_38_curated
SR-VP_26_10_2020_1_100CM_scaffold_4192145_3
unknown

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1819..2028
DNA (210bp) protein (70aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein
4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7V4P2_DESML
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_4192145_4
Aciduliprofundum sp. MAR08-339, Aciduliprofundum, Euryarchaeota, Archaea

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comp(2025..2636)
DNA (612bp) protein (204aa)
phosphoesterase, MJ0936 family
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035F96BE
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=673860 species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum sp. (strain MAR08-339).;"
SR-VP_26_10_2020_1_100CM_scaffold_4192145_5
unknown

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2742..3725
DNA (984bp) protein (328aa)
biotin synthase-related enzyme
Biotin synthase-related enzyme n=1 Tax=Anaerobaculum mobile (strain ATCC BAA-54 / DSM 13181 / NGA) RepID=I4BWS6_ANAMD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_4192145_6
unknown

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3841..4755
DNA (915bp) protein (305aa)
ribonuclease Z
Ribonuclease Z n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KY00_METHD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_4192145_7
unknown

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4788..5132
DNA (345bp) protein (115aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_4192145_8
unknown

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5581..7284
DNA (1704bp) protein (568aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XKM5_METZD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_4192145_9
unknown

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7281..8543
DNA (1263bp) protein (421aa)
thiamine biosynthesis protein ThiC
Phosphomethylpyrimidine synthase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XKN0_METZD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_4192145_10
GWB1_Spirochaetes_48_6_curated, Spirochaetes, Bacteria

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8684..11161
DNA (2478bp) protein (826aa)
Radical SAM domain-containing protein
Radical SAM domain protein id=3460308 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_48_6_curated
SR-VP_26_10_2020_1_100CM_scaffold_4192145_11
unknown

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comp(11370..11486)
DNA (117bp) protein (39aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_4192145_12
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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11643..12800
DNA (1158bp) protein (386aa)
hypothetical protein
Conserved protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PUU4_METMA
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_4192145_13
unknown

Not on your lists

13029..13232
DNA (204bp) protein (68aa)
hypothetical protein
YHS domain-containing protein n=1 Tax=Methanolinea tarda NOBI-1 RepID=G6FGL5_9EURY
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_4192145_14
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13261..13656
DNA (396bp) protein (132aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_4192145_15
unknown

Not on your lists

13656..14132
DNA (477bp) protein (159aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RH01_MOOTA
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 15 items

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